Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.235007
Ttll1
tubulin tyrosine ligase-like 1
15
319953
Gene Ontology
ligase activity
Human Homolog
TTLL1[tubulin tyrosine ligase-like family, member 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 82 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGGCAAAGC (
4
)
52.2
0.0522
P8 Cb GC
CACACACACA (
106
)
11.4
0.0114
P8 Cb GC
GTGACCTCCT
8.2
0.0082
P8 Cb GC
TAAACCCAGC
3.3
0.0033
P8 Cb GC
TAGACCAGGC
(
6
)
3.3
0.0033
P8 Cb GC
GGGAGGACTA
(
4
)
1.6
0.0016
Cb medulloblastoma
TGGGCAAAGC (
4
)
37
0.037
Cb medulloblastoma
CACACACACA (
106
)
32.4
0.0324
P8 GC+1d culture
TGGGCAAAGC (
4
)
53.7
0.0537
P8 GC+1d culture
CACACACAAA (
7
)
6.8
0.0068
P8 GC+1d culture
CACACACACA (
106
)
6.8
0.0068
P8 GC+1d culture
TAGACCAGGC
(
6
)
6.8
0.0068
P8 GC+1d culture
TAAACCCAGC
2.3
0.0023
P8 GC+SHH+1d culture
TGGGCAAAGC (
4
)
85.5
0.0855
P8 GC+SHH+1d culture
CACACACACA (
106
)
9.4
0.0094
P8 GC+SHH+1d culture
TAGACCAGGC
(
6
)
8.2
0.0082
P8 GC+SHH+1d culture
CACACACAAA (
7
)
4.7
0.0047
P8 GC+SHH+1d culture
GTGACCTCCT
3.5
0.0035
P8 GC+SHH+1d culture
GGGAGGACTA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGGGGAAAG
(
10
)
1.2
0.0012
3T3 fibroblasts
TGGGCAAAGC (
4
)
129.7
0.1297
3T3 fibroblasts
CACACACACA (
106
)
17.5
0.0175
E15 cortex
TGGGCAAAGC (
4
)
153.4
0.1534
E15 cortex
CACACACAAA (
7
)
4.9
0.0049
E15 cortex
CACACACACA (
106
)
4.9
0.0049
E15 cortex
TAGACCAGGC
(
6
)
4.9
0.0049
P1 cortex
TGGGCAAAGC (
4
)
36.4
0.0364
P1 cortex
CACACACACA (
106
)
27.3
0.0273
Hypothalamus
CACACACACA (
106
)
96
0.096
Hypothalamus
TGGGCAAAGC (
4
)
38
0.038
Hypothalamus
TAGACCAGGC
(
6
)
9.1
0.0091
Hypothalamus
GGGAGGACTA
(
4
)
1.8
0.0018
E12.5 retina
TGGGCAAAGC (
4
)
127.7
0.1277
E12.5 retina
CACACACAAA (
7
)
3.8
0.0038
E12.5 retina
CACACACACA (
106
)
3.8
0.0038
E12.5 retina
TAGACCAGGC
(
6
)
3.8
0.0038
E12.5 retina
GTGGGGAAAG
(
10
)
1.9
0.0019
E14.5 retina
TGGGCAAAGC (
4
)
76.5
0.0765
E14.5 retina
CACACACACA (
106
)
18.2
0.0182
E14.5 retina
CACACACAAA (
7
)
3.6
0.0036
E14.5 retina
TAGACCAGGC
(
6
)
1.8
0.0018
E16.5 retina
TGGGCAAAGC (
4
)
81.5
0.0815
E16.5 retina
CACACACACA (
106
)
12.7
0.0127
E16.5 retina
TAGACCAGGC
(
6
)
5.4
0.0054
E16.5 retina
CACACACAAA (
7
)
1.8
0.0018
E16.5 retina
TGGCAAAGCA
1.8
0.0018
E18.5 retina
TGGGCAAAGC (
4
)
87.3
0.0873
E18.5 retina
TAGACCAGGC
(
6
)
10.9
0.0109
E18.5 retina
CACACACACA (
106
)
5.5
0.0055
E18.5 retina
CACACACAAA (
7
)
3.6
0.0036
E18.5 retina
GGGAGGACTA
(
4
)
1.8
0.0018
P0.5 retina
TGGGCAAAGC (
4
)
49.1
0.0491
P0.5 retina
CACACACACA (
106
)
7.9
0.0079
P0.5 retina
TAGACCAGGC
(
6
)
3.9
0.0039
P2.5 retina
TGGGCAAAGC (
4
)
26.4
0.0264
P2.5 retina
CACACACACA (
106
)
21.1
0.0211
P2.5 retina
TAGACCAGGC
(
6
)
14.1
0.0141
P4.5 retina
TGGGCAAAGC (
4
)
25.8
0.0258
P4.5 retina
TAGACCAGGC
(
6
)
13.9
0.0139
P4.5 retina
CACACACACA (
106
)
7.9
0.0079
P4.5 retina
GGGAGGACTA
(
4
)
2
0.002
P6.5 retina
TGGGCAAAGC (
4
)
43.4
0.0434
P6.5 retina
TAGACCAGGC
(
6
)
13.3
0.0133
P6.5 retina
CACACACACA (
106
)
8.3
0.0083
P6.5 retina
CACACACAAA (
7
)
1.7
0.0017
P10.5 crx- retina
TGGGCAAAGC (
4
)
63.2
0.0632
P10.5 crx- retina
CACACACACA (
106
)
5.6
0.0056
P10.5 crx- retina
TAGACCAGGC
(
6
)
1.9
0.0019
P10.5 crx+ retina
TGGGCAAAGC (
4
)
69.2
0.0692
P10.5 crx+ retina
CACACACACA (
106
)
7.7
0.0077
P10.5 crx+ retina
TAGACCAGGC
(
6
)
7.7
0.0077
Adult retinal
TGGGCAAAGC (
4
)
18.5
0.0185
Adult retinal
CACACACACA (
106
)
16.7
0.0167
Adult retinal
CACACACAAA (
7
)
5.6
0.0056
Adult retinal
TAGACCAGGC
(
6
)
5.6
0.0056
Adult retinal
GTGGGGAAAG
(
10
)
1.9
0.0019
ONL
TGGGCAAAGC (
4
)
30.6
0.0306
ONL
CACACACACA (
106
)
21.1
0.0211
ONL
TAGACCAGGC
(
6
)
7.7
0.0077
ONL
TGGCAAAGCA
3.8
0.0038
ONL
CACACACAAA (
7
)
1.9
0.0019
ONL
GTGGGGAAAG
(
10
)
1.9
0.0019
