Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.235542	Taf4a	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor	2		228980
Gene Ontology	general RNA polymerase II transcription factor activity | nucleus | ovarian follicle development | regulation of transcription from Pol II promoter | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex | transcription factor TFIID complex | transcription from Pol II promoter
Human Homolog	TAF4[TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGAAATGGA (5) 3.3 0.0033 Cb medulloblastoma TAAATTTTGC 6.9 0.0069 P8 GC+1d culture AAGAAATGGA (5) 2.3 0.0023 P8 GC+1d culture AAAAAATGGA (8) 1.1 0.0011 P8 GC+1d culture TAAATTTTGC 1.1 0.0011 P8 GC+SHH+1d culture TAAATTTTGC 3.5 0.0035 P8 GC+SHH+1d culture AAGAAATGGA (5) 2.3 0.0023 E12.5 retina TAAATTTTGC 3.8 0.0038 E12.5 retina AAAAAATGGA (8) 1.9 0.0019 E12.5 retina AGAATCCACA (3) 1.9 0.0019 E14.5 retina TAAATTTTGC 5.5 0.0055 E14.5 retina AAAAAATGGA (8) 1.8 0.0018 E14.5 retina AAGAAATGGA (5) 1.8 0.0018 E16.5 retina AAAAAATGGA (8) 1.8 0.0018 E16.5 retina AGAATCCACA (3) 1.8 0.0018 E16.5 retina TAAATTTTGC 1.8 0.0018 E18.5 retina TAAATTTTGC 5.5 0.0055 P0.5 retina CTCACCACAC (4) 3.9 0.0039 P0.5 retina TAAATTTTGC 3.9 0.0039 P2.5 retina AAGAAATGGA (5) 1.8 0.0018 P2.5 retina AGAATCCACA (3) 1.8 0.0018 P2.5 retina TAAATTTTGC 1.8 0.0018 P4.5 retina CTCACCACAC (4) 2 0.002 P4.5 retina TAAATTTTGC 2 0.002 P6.5 retina TAAATTTTGC 3.3 0.0033 P6.5 retina AAAAAATGGA (8) 1.7 0.0017 P6.5 retina AAGAAATGGA (5) 1.7 0.0017 P10.5 crx+ retina TAAATTTTGC 1.9 0.0019 Adult retinal AGAATCCACA (3) 1.9 0.0019 Adult retinal GCCACACAGG (7) 1.9 0.0019 Adult retinal TAAATTTTGC 1.9 0.0019 ONL TAAATTTTGC 5.7 0.0057 ONL GCCACACAGG (7) 3.8 0.0038 ONL AGAATCCACA (3) 1.9 0.0019