Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.235898	4930507D05Rik	RIKEN cDNA 4930507D05 gene	10		74706
Mm.235898	Supv3l1	suppressor of var1, 3-like 1 (S. cerevisiae)	10		338359
Human Homolog	SUPV3L1[suppressor of var1, 3-like 1 (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGATGCTGG (15) 13.1 0.0131 Cb medulloblastoma TGGATGCTGG (15) 4.6 0.0046 P8 GC+1d culture TGGATGCTGG (15) 8 0.008 P8 GC+1d culture CCAAACAAAT (5) 2.3 0.0023 P8 GC+1d culture CTCAGGCAGC (3) 1.1 0.0011 P8 GC+SHH+1d culture CCAAACAAAT (5) 2.3 0.0023 P8 GC+SHH+1d culture TGGATGCTGG (15) 2.3 0.0023 P8 GC+SHH+1d culture CTCAGGCAGC (3) 1.2 0.0012 3T3 fibroblasts CTCAGGCAGC (3) 3.5 0.0035 3T3 fibroblasts TGGATGCTGG (15) 3.5 0.0035 E15 cortex TGGATGCTGG (15) 14.8 0.0148 Hypothalamus TGGATGCTGG (15) 5.4 0.0054 Hypothalamus CCAAACAAAT (5) 3.6 0.0036 E12.5 retina TGGATGCTGG (15) 5.6 0.0056 E12.5 retina CCAAACAAAT (5) 1.9 0.0019 E12.5 retina CTCAGGCAGC (3) 1.9 0.0019 E14.5 retina TGGATGCTGG (15) 18.2 0.0182 E16.5 retina TGGATGCTGG (15) 30.8 0.0308 E16.5 retina CTCAGGCAGC (3) 3.6 0.0036 E18.5 retina CTCAGGCAGC (3) 3.6 0.0036 E18.5 retina CAGTCAAAGC (2) 1.8 0.0018 E18.5 retina TGGATGCTGG (15) 1.8 0.0018 P0.5 retina TGGATGCTGG (15) 7.9 0.0079 P0.5 retina CTCAGGCAGC (3) 2 0.002 P2.5 retina TGGATGCTGG (15) 15.8 0.0158 P2.5 retina CAGTCAAAGC (2) 1.8 0.0018 P4.5 retina TGGATGCTGG (15) 5.9 0.0059 P4.5 retina CTCAGGCAGC (3) 2 0.002 P6.5 retina CCAAACAAAT (5) 6.7 0.0067 P6.5 retina TGGATGCTGG (15) 6.7 0.0067 P6.5 retina CTCAGGCAGC (3) 1.7 0.0017 P10.5 crx- retina CTCAGGCAGC (3) 9.3 0.0093 P10.5 crx- retina TGGATGCTGG (15) 5.6 0.0056 P10.5 crx- retina CAGTCAAAGC (2) 1.9 0.0019 P10.5 crx- retina CCAAACAAAT (5) 1.9 0.0019 P10.5 crx+ retina TGGATGCTGG (15) 5.8 0.0058 P10.5 crx+ retina CCAAACAAAT (5) 1.9 0.0019 Adult retinal TGGATGCTGG (15) 5.6 0.0056 Adult retinal CCAAACAAAT (5) 1.9 0.0019 Adult retinal CTCAGGCAGC (3) 1.9 0.0019