Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.236004
Vps4a
vacuolar protein sorting 4a (yeast)
8
116733
Mm.236004
2610019N19Rik
RIKEN cDNA 2610019N19 gene
8
68023
Human Homolog
PDF[peptide deformylase-like protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 33 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGAGGAGTG
(
6
)
3.3
0.0033
P8 Cb GC
TAGGACACTT
(
4
)
1.6
0.0016
Cb medulloblastoma
TAGGACACTT
(
4
)
4.6
0.0046
Cb medulloblastoma
GCAAGAAGCC
(
7
)
2.3
0.0023
P8 GC+1d culture
TAGGACACTT
(
4
)
2.3
0.0023
P8 GC+1d culture
GCAAGAAGCC
(
7
)
1.1
0.0011
P8 GC+SHH+1d culture
GAGAGGAGTG
(
6
)
2.3
0.0023
P8 GC+SHH+1d culture
TAGGACACTT
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GCAAGAAGCC
(
7
)
1.2
0.0012
E15 cortex
TAGGACACTT
(
4
)
4.9
0.0049
P1 cortex
GAGAGGAGTG
(
6
)
13.6
0.0136
P1 cortex
TAGGACACTT
(
4
)
13.6
0.0136
Hypothalamus
GAGAGGAGTG
(
6
)
1.8
0.0018
E12.5 retina
GAGAGGAGTG
(
6
)
5.6
0.0056
E12.5 retina
TAGGACACTT
(
4
)
1.9
0.0019
E14.5 retina
TAGGACACTT
(
4
)
3.6
0.0036
E16.5 retina
GAGAGGAGTG
(
6
)
3.6
0.0036
E18.5 retina
CAGACTTGGG (
4
)
1.8
0.0018
E18.5 retina
GAGAGGAGTG
(
6
)
1.8
0.0018
P0.5 retina
TAGGACACTT
(
4
)
9.8
0.0098
P0.5 retina
GAGAGGAGTG
(
6
)
2
0.002
P2.5 retina
TAGGACACTT
(
4
)
1.8
0.0018
P4.5 retina
GAGAGGAGTG
(
6
)
5.9
0.0059
P4.5 retina
CAGACTTGGG (
4
)
2
0.002
P6.5 retina
GAGAGGAGTG
(
6
)
6.7
0.0067
P6.5 retina
TAGGACACTT
(
4
)
3.3
0.0033
P6.5 retina
CAGACTTGGG (
4
)
1.7
0.0017
P10.5 crx- retina
GAGAGGAGTG
(
6
)
7.4
0.0074
P10.5 crx- retina
GCAAGAAGCC
(
7
)
1.9
0.0019
P10.5 crx+ retina
TAGGACACTT
(
4
)
1.9
0.0019
Adult retinal
TAGGACACTT
(
4
)
13
0.013
Adult retinal
GAGAGGAGTG
(
6
)
1.9
0.0019
ONL
TAGGACACTT
(
4
)
1.9
0.0019
