Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.236068
Synj2
synaptojanin 2
17
17 3.3 cM
20975
Mm.236068
D17Ertd141e
DNA segment, Chr 17, ERATO Doi 141, expressed
17
17 5.0 cM
51989
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTTCCCTTT (
7
)
3.3
0.0033
P8 Cb GC
TCCTATAAAG
(
3
)
3.3
0.0033
P8 Cb GC
ACCAGAACGC (
3
)
1.6
0.0016
P8 Cb GC
TTACCAGAAG
(
5
)
1.6
0.0016
Cb medulloblastoma
GCTTCCCTTT (
7
)
2.3
0.0023
P8 GC+1d culture
GCTTCCCTTT (
7
)
3.4
0.0034
P8 GC+1d culture
GCCCCTGTGT (
3
)
1.1
0.0011
P8 GC+1d culture
TCCTATAAAG
(
3
)
1.1
0.0011
3T3 fibroblasts
TCCTATAAAG
(
3
)
3.5
0.0035
E15 cortex
GTGCTTCTGA
(
3
)
4.9
0.0049
P1 cortex
GCCCCTGTGT (
3
)
9.1
0.0091
P1 cortex
TCCTATAAAG
(
3
)
9.1
0.0091
Hypothalamus
TCCTATAAAG
(
3
)
3.6
0.0036
Hypothalamus
ACCAGAACGC (
3
)
1.8
0.0018
E12.5 retina
GCTTCCCTTT (
7
)
5.6
0.0056
E12.5 retina
GCCCCTGTGT (
3
)
1.9
0.0019
E14.5 retina
TGGATTTCTG
(
4
)
1.8
0.0018
E16.5 retina
GCCCCTGTGT (
3
)
3.6
0.0036
E16.5 retina
GTGCTTCTGA
(
3
)
1.8
0.0018
E16.5 retina
TTACCAGAAG
(
5
)
1.8
0.0018
E18.5 retina
GCCCCTGTGT (
3
)
3.6
0.0036
E18.5 retina
GCTTCCCTTT (
7
)
1.8
0.0018
E18.5 retina
TGGATTTCTG
(
4
)
1.8
0.0018
P0.5 retina
ACCAGAACGC (
3
)
3.9
0.0039
P0.5 retina
GCTTCCCTTT (
7
)
2
0.002
P2.5 retina
GCCCCTGTGT (
3
)
8.8
0.0088
P2.5 retina
TGGATTTCTG
(
4
)
3.5
0.0035
P2.5 retina
GCTTCCCTTT (
7
)
1.8
0.0018
P2.5 retina
TTACCAGAAG
(
5
)
1.8
0.0018
P4.5 retina
GCCCCTGTGT (
3
)
11.9
0.0119
P4.5 retina
GCTTCCCTTT (
7
)
4
0.004
P4.5 retina
TGGATTTCTG
(
4
)
2
0.002
P6.5 retina
GCCCCTGTGT (
3
)
15
0.015
P6.5 retina
GTGCTTCTGA
(
3
)
3.3
0.0033
P6.5 retina
GCTTCCCTTT (
7
)
1.7
0.0017
P6.5 retina
TGGATTTCTG
(
4
)
1.7
0.0017
P10.5 crx- retina
GCCCCTGTGT (
3
)
26
0.026
P10.5 crx- retina
TCCTATAAAG
(
3
)
3.7
0.0037
P10.5 crx- retina
GCTTCCCTTT (
7
)
1.9
0.0019
P10.5 crx- retina
TTACCAGAAG
(
5
)
1.9
0.0019
P10.5 crx+ retina
GCCCCTGTGT (
3
)
28.8
0.0288
P10.5 crx+ retina
TCCTATAAAG
(
3
)
5.8
0.0058
P10.5 crx+ retina
GCTTCCCTTT (
7
)
3.8
0.0038
P10.5 crx+ retina
TGGATTTCTG
(
4
)
1.9
0.0019
Adult retinal
GCTTCCCTTT (
7
)
1.9
0.0019
ONL
GCCCCTGTGT (
3
)
7.7
0.0077
ONL
GCTTCCCTTT (
7
)
5.7
0.0057
ONL
GTGCTTCTGA
(
3
)
1.9
0.0019
ONL
TCCTATAAAG
(
3
)
1.9
0.0019
ONL
TGGATTTCTG
(
4
)
1.9
0.0019
