Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.236103
4931428F04Rik
RIKEN cDNA 4931428F04 gene
8
74356
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAAAAAAAAA (
196
)
47.3
0.0473
P8 Cb GC
AGAAGGAGGT (
5
)
16.3
0.0163
Cb medulloblastoma
TAAAAAAAAA (
196
)
106.4
0.1064
Cb medulloblastoma
AGATGGCTTT (
2
)
4.6
0.0046
P8 GC+1d culture
AGAAGGAGGT (
5
)
82.2
0.0822
P8 GC+1d culture
TAAAAAAAAA (
196
)
66.2
0.0662
P8 GC+1d culture
TTAGTCTTGG
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TAAAAAAAAA (
196
)
93.7
0.0937
P8 GC+SHH+1d culture
AGAAGGAGGT (
5
)
51.5
0.0515
P8 GC+SHH+1d culture
TTAGTCTTGG
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
AGATGGCTTT (
2
)
1.2
0.0012
3T3 fibroblasts
AGAAGGAGGT (
5
)
14
0.014
3T3 fibroblasts
AGATGGCTTT (
2
)
7
0.007
3T3 fibroblasts
TAAAAAAAAA (
196
)
7
0.007
E15 cortex
AGAAGGAGGT (
5
)
143.5
0.1435
E15 cortex
TAAAAAAAAA (
196
)
9.9
0.0099
E15 cortex
TTAGTCTTGG
(
3
)
9.9
0.0099
P1 cortex
AGAAGGAGGT (
5
)
168.2
0.1682
P1 cortex
TAAAAAAAAA (
196
)
50
0.05
P1 cortex
TTAGTCTTGG
(
3
)
13.6
0.0136
Hypothalamus
TAAAAAAAAA (
196
)
32.6
0.0326
Hypothalamus
AGAAGGAGGT (
5
)
19.9
0.0199
Hypothalamus
AGATGGCTTT (
2
)
1.8
0.0018
E12.5 retina
TAAAAAAAAA (
196
)
24.4
0.0244
E12.5 retina
AGAAGGAGGT (
5
)
22.5
0.0225
E14.5 retina
TAAAAAAAAA (
196
)
41.9
0.0419
E14.5 retina
AGAAGGAGGT (
5
)
10.9
0.0109
E16.5 retina
TAAAAAAAAA (
196
)
23.5
0.0235
E16.5 retina
AGAAGGAGGT (
5
)
16.3
0.0163
E16.5 retina
TTAGTCTTGG
(
3
)
5.4
0.0054
E18.5 retina
TAAAAAAAAA (
196
)
107.3
0.1073
E18.5 retina
AGAAGGAGGT (
5
)
34.6
0.0346
E18.5 retina
TTAGTCTTGG
(
3
)
3.6
0.0036
P0.5 retina
AGAAGGAGGT (
5
)
115.8
0.1158
P0.5 retina
TAAAAAAAAA (
196
)
37.3
0.0373
P0.5 retina
AGATGGCTTT (
2
)
2
0.002
P2.5 retina
TAAAAAAAAA (
196
)
72.2
0.0722
P2.5 retina
AGAAGGAGGT (
5
)
28.2
0.0282
P2.5 retina
TTAGTCTTGG
(
3
)
3.5
0.0035
P4.5 retina
TAAAAAAAAA (
196
)
122.8
0.1228
P4.5 retina
AGAAGGAGGT (
5
)
13.9
0.0139
P6.5 retina
TAAAAAAAAA (
196
)
63.4
0.0634
P6.5 retina
AGAAGGAGGT (
5
)
21.7
0.0217
P10.5 crx- retina
AGAAGGAGGT (
5
)
9.3
0.0093
P10.5 crx- retina
TAAAAAAAAA (
196
)
9.3
0.0093
P10.5 crx+ retina
TAAAAAAAAA (
196
)
25
0.025
P10.5 crx+ retina
AGAAGGAGGT (
5
)
7.7
0.0077
Adult retinal
TAAAAAAAAA (
196
)
18.5
0.0185
Adult retinal
AGAAGGAGGT (
5
)
3.7
0.0037
ONL
TAAAAAAAAA (
196
)
28.7
0.0287
ONL
AGAAGGAGGT (
5
)
1.9
0.0019
