Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.236127
Hdhd2
haloacid dehalogenase-like hydrolase domain containing 2
18
76987
Human Homolog
HDHD2[haloacid dehalogenase-like hydrolase domain containing 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 29 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACCTTTTCTT (
9
)
8.2
0.0082
P8 Cb GC
ACTGACTCCA (
4
)
1.6
0.0016
Cb medulloblastoma
ACCTTTTCTT (
9
)
6.9
0.0069
Cb medulloblastoma
ACTGACTCAC
(
3
)
2.3
0.0023
Cb medulloblastoma
ACTGACTCCA (
4
)
2.3
0.0023
P8 GC+1d culture
ACCTTTTCTT (
9
)
14.8
0.0148
P8 GC+SHH+1d culture
ACCTTTTCTT (
9
)
14.1
0.0141
P8 GC+SHH+1d culture
CTGGGGCTCT (
6
)
1.2
0.0012
3T3 fibroblasts
ACTGACTCAC
(
3
)
3.5
0.0035
E15 cortex
ACTGACTCAC
(
3
)
4.9
0.0049
E15 cortex
ACTGACTCCA (
4
)
4.9
0.0049
P1 cortex
ACCTTTTCTT (
9
)
13.6
0.0136
Hypothalamus
ACCTTTTCTT (
9
)
5.4
0.0054
Hypothalamus
ACTGACTCAC
(
3
)
1.8
0.0018
E12.5 retina
ACCTTTTCTT (
9
)
7.5
0.0075
E12.5 retina
CTGGGGCTCT (
6
)
1.9
0.0019
E14.5 retina
ACCTTTTCTT (
9
)
21.9
0.0219
E14.5 retina
CTGGGGCTCT (
6
)
1.8
0.0018
E16.5 retina
ACCTTTTCTT (
9
)
14.5
0.0145
E16.5 retina
ACTGACTCAC
(
3
)
3.6
0.0036
E18.5 retina
ACCTTTTCTT (
9
)
7.3
0.0073
P0.5 retina
ACCTTTTCTT (
9
)
11.8
0.0118
P2.5 retina
ACCTTTTCTT (
9
)
8.8
0.0088
P4.5 retina
ACCTTTTCTT (
9
)
19.8
0.0198
P6.5 retina
ACCTTTTCTT (
9
)
3.3
0.0033
P10.5 crx- retina
ACCTTTTCTT (
9
)
20.4
0.0204
P10.5 crx- retina
ACTGACTCAC
(
3
)
7.4
0.0074
P10.5 crx+ retina
ACCTTTTCTT (
9
)
5.8
0.0058
Adult retinal
ACCTTTTCTT (
9
)
3.7
0.0037
