Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.236454
AW822216
expressed sequence AW822216
1
98733
Human Homolog
KIAA0657[KIAA0657 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTGTGTG (
115
)
27.7
0.0277
Cb medulloblastoma
TGTGTGTGTG (
115
)
30.1
0.0301
Cb medulloblastoma
CCCTGGTCCT
(
3
)
2.3
0.0023
P8 GC+1d culture
TGTGTGTGTG (
115
)
27.4
0.0274
P8 GC+SHH+1d culture
TGTGTGTGTG (
115
)
28.1
0.0281
P8 GC+SHH+1d culture
CCCAAAAAAA (
19
)
3.5
0.0035
P8 GC+SHH+1d culture
GCGACGAACG
2.3
0.0023
P8 GC+SHH+1d culture
TGGTTGGTGG (
11
)
1.2
0.0012
3T3 fibroblasts
TGTGTGTGTG (
115
)
28
0.028
3T3 fibroblasts
TGGTTGGTGG (
11
)
3.5
0.0035
E15 cortex
CCCAAAAAAA (
19
)
4.9
0.0049
E15 cortex
CCCTGGTCCT
(
3
)
4.9
0.0049
E15 cortex
GCGACGAACG
4.9
0.0049
E15 cortex
TGGTTGGTGG (
11
)
4.9
0.0049
P1 cortex
TGTGTGTGTG (
115
)
18.2
0.0182
P1 cortex
GCGACGAACG
4.5
0.0045
P1 cortex
TGGTTGGTGG (
11
)
4.5
0.0045
Hypothalamus
TGTGTGTGTG (
115
)
25.4
0.0254
E12.5 retina
TGTGTGTGTG (
115
)
43.2
0.0432
E12.5 retina
GCGACGAACG
1.9
0.0019
E14.5 retina
TGTGTGTGTG (
115
)
54.7
0.0547
E14.5 retina
TGGTTGGTGG (
11
)
3.6
0.0036
E16.5 retina
TGTGTGTGTG (
115
)
39.8
0.0398
E16.5 retina
CCCAAAAAAA (
19
)
1.8
0.0018
E16.5 retina
TGGTTGGTGG (
11
)
1.8
0.0018
E18.5 retina
TGTGTGTGTG (
115
)
47.3
0.0473
E18.5 retina
CCCAAAAAAA (
19
)
3.6
0.0036
E18.5 retina
GCGACGAACG
1.8
0.0018
P0.5 retina
TGTGTGTGTG (
115
)
21.6
0.0216
P0.5 retina
CCCAAAAAAA (
19
)
2
0.002
P0.5 retina
CCCTGGTCCT
(
3
)
2
0.002
P0.5 retina
GCGACGAACG
2
0.002
P0.5 retina
TGGTTGGTGG (
11
)
2
0.002
P2.5 retina
TGTGTGTGTG (
115
)
35.2
0.0352
P2.5 retina
CCCAAAAAAA (
19
)
1.8
0.0018
P4.5 retina
TGTGTGTGTG (
115
)
47.6
0.0476
P4.5 retina
TGGTTGGTGG (
11
)
5.9
0.0059
P4.5 retina
CCCAAAAAAA (
19
)
2
0.002
P4.5 retina
GCGACGAACG
2
0.002
P6.5 retina
TGTGTGTGTG (
115
)
41.7
0.0417
P6.5 retina
TGGTTGGTGG (
11
)
5
0.005
P6.5 retina
CCCAAAAAAA (
19
)
3.3
0.0033
P10.5 crx- retina
TGTGTGTGTG (
115
)
59.4
0.0594
P10.5 crx- retina
GCGACGAACG
1.9
0.0019
P10.5 crx+ retina
TGTGTGTGTG (
115
)
44.2
0.0442
Adult retinal
TGTGTGTGTG (
115
)
53.7
0.0537
Adult retinal
CCCAAAAAAA (
19
)
1.9
0.0019
Adult retinal
TGGTTGGTGG (
11
)
1.9
0.0019
ONL
TGTGTGTGTG (
115
)
23
0.023
ONL
TGGTTGGTGG (
11
)
3.8
0.0038
ONL
CCCAAAAAAA (
19
)
1.9
0.0019
