Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.236513	Pcbp2	poly(rC) binding protein 2	15	15 61.7 cM	18521
Gene Ontology	DNA binding | nucleic acid binding | nucleus | ribonucleoprotein complex | RNA binding | RNA processing
Human Homolog	PCBP2[poly(rC) binding protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 148 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAATGTAAG (6) 73.4 0.0734 P8 Cb GC AGCCAAACAA (5) 4.9 0.0049 P8 Cb GC ATTTGTTATT (4) 1.6 0.0016 P8 Cb GC GAAAGGAAGT (2) 1.6 0.0016 P8 Cb GC GAATTTTTTT (5) 1.6 0.0016 P8 Cb GC TTAAGTAAAA (4) 1.6 0.0016 Cb medulloblastoma GAAATGTAAG (6) 46.2 0.0462 Cb medulloblastoma GAATTTTTTT (5) 4.6 0.0046 Cb medulloblastoma TATGATCAAT (2) 4.6 0.0046 Cb medulloblastoma AACTCACCAT (2) 2.3 0.0023 Cb medulloblastoma AGCCAAACAA (5) 2.3 0.0023 Cb medulloblastoma ATTTTTTAAT (4) 2.3 0.0023 Cb medulloblastoma CTGTTAGTCG (4) 2.3 0.0023 Cb medulloblastoma GAAAGGAAGT (2) 2.3 0.0023 P8 GC+1d culture GAAATGTAAG (6) 42.2 0.0422 P8 GC+1d culture ATTTGTTATT (4) 2.3 0.0023 P8 GC+1d culture AGCCAAACAA (5) 1.1 0.0011 P8 GC+1d culture ATTTTTTAAT (4) 1.1 0.0011 P8 GC+1d culture CCACCTGTCT (5) 1.1 0.0011 P8 GC+1d culture GGTGGTGAAC (3) 1.1 0.0011 P8 GC+1d culture TATGATCAAT (2) 1.1 0.0011 P8 GC+1d culture TTAAGTAAAA (4) 1.1 0.0011 P8 GC+SHH+1d culture GAAATGTAAG (6) 73.8 0.0738 P8 GC+SHH+1d culture ATTTGTTATT (4) 4.7 0.0047 P8 GC+SHH+1d culture AGCCAAACAA (5) 1.2 0.0012 P8 GC+SHH+1d culture CCACCTGTCT (5) 1.2 0.0012 P8 GC+SHH+1d culture GAATTTTTTT (5) 1.2 0.0012 P8 GC+SHH+1d culture GAGGGGGAGG (4) 1.2 0.0012 3T3 fibroblasts GAAATGTAAG (6) 7 0.007 3T3 fibroblasts AGCCAAACAA (5) 3.5 0.0035 3T3 fibroblasts ATTTGTTATT (4) 3.5 0.0035 E15 cortex GAAATGTAAG (6) 9.9 0.0099 E15 cortex ATTTGTTATT (4) 4.9 0.0049 E15 cortex ATTTTGTAAT (2) 4.9 0.0049 E15 cortex GAATTTTTTT (5) 4.9 0.0049 E15 cortex GCAACACCGG (4) 4.9 0.0049 E15 cortex GGGAGCAGCT (2) 4.9 0.0049 E15 cortex TCAGGAGATT (4) 4.9 0.0049 P1 cortex GAAATGTAAG (6) 27.3 0.0273 P1 cortex AGAAGTAGTT 4.5 0.0045 P1 cortex ATTTGTTATT (4) 4.5 0.0045 P1 cortex TCAGGAGATT (4) 4.5 0.0045 Hypothalamus GAAATGTAAG (6) 25.4 0.0254 Hypothalamus ACAAACAAAA (3) 3.6 0.0036 Hypothalamus AGTGGATGAT (3) 3.6 0.0036 Hypothalamus TAACCTAGGC (3) 3.6 0.0036 Hypothalamus AGCCAAACAA (5) 1.8 0.0018 Hypothalamus ATTCATCTGT (5) 1.8 0.0018 Hypothalamus GGGAGCAGCT (2) 1.8 0.0018 Hypothalamus TATGATCAAT (2) 1.8 0.0018 E12.5 retina GAAATGTAAG (6) 97.6 0.0976 E12.5 retina AGCCAAACAA (5) 7.5 0.0075 E12.5 retina TCAGGAGATT (4) 3.8 0.0038 E12.5 retina AGTGGATGAT (3) 1.9 0.0019 E12.5 retina ATTTGTTATT (4) 1.9 0.0019 E12.5 retina CCACCTGTCT (5) 1.9 0.0019 E12.5 retina GAGGGGGAGG (4) 1.9 0.0019 E12.5 retina TTGGAGACTC (2) 1.9 0.0019 E14.5 retina GAAATGTAAG (6) 98.4 0.0984 E14.5 retina ATTTGTTATT (4) 7.3 0.0073 E14.5 retina CTGTTAGTCG (4) 5.5 0.0055 E14.5 retina AGCCAAACAA (5) 3.6 0.0036 E14.5 retina GGTGGTGAAC (3) 3.6 0.0036 E14.5 retina AACTCACCAT (2) 1.8 0.0018 E14.5 retina AGTGGATGAT (3) 1.8 0.0018 E14.5 retina ATCCATCTGT (4) 1.8 0.0018 E14.5 retina ATTCATCTGT (5) 1.8 0.0018 E14.5 retina CCACCTGTCT (5) 1.8 0.0018 E14.5 retina GAAAGGAAGT (2) 1.8 0.0018 E14.5 retina TTAAGTAAAA (4) 1.8 0.0018 E16.5 retina GAAATGTAAG (6) 115.9 0.1159 E16.5 retina ATTTGTTATT (4) 10.9 0.0109 E16.5 retina GGTGGTGAAC (3) 3.6 0.0036 E16.5 retina AACTCACCAT (2) 1.8 0.0018 E16.5 retina AACTCTTGGC 1.8 0.0018 E16.5 retina ATCCATCTGT (4) 1.8 0.0018 E16.5 retina ATTTTGTAAT (2) 1.8 0.0018 E16.5 retina CTGTTAGTCG (4) 1.8 0.0018 E16.5 retina GAGGGGGAGG (4) 1.8 0.0018 E16.5 retina GCAACACCGG (4) 1.8 0.0018 E16.5 retina GGGAGCAGCT (2) 1.8 0.0018 E16.5 retina TAACCTAGGC (3) 1.8 0.0018 E18.5 retina GAAATGTAAG (6) 63.7 0.0637 E18.5 retina AGCCAAACAA (5) 9.1 0.0091 E18.5 retina ATTTGTTATT (4) 7.3 0.0073 E18.5 retina AGTGGATGAT (3) 3.6 0.0036 E18.5 retina ACAAACAAAA (3) 1.8 0.0018 E18.5 retina ATCCATCTGT (4) 1.8 0.0018 E18.5 retina TTAAGTAAAA (4) 1.8 0.0018 P0.5 retina GAAATGTAAG (6) 55 0.055 P0.5 retina ATTTGTTATT (4) 7.9 0.0079 P0.5 retina CTGTTAGTCG (4) 3.9 0.0039 P0.5 retina AACTCTTGGC 2 0.002 P0.5 retina GAAAGGAAGT (2) 2 0.002 P0.5 retina GAATTTTTTT (5) 2 0.002 P2.5 retina GAAATGTAAG (6) 84.5 0.0845 P2.5 retina ATTTGTTATT (4) 7 0.007 P2.5 retina AACTCTTGGC 1.8 0.0018 P2.5 retina AGCCAAACAA (5) 1.8 0.0018 P2.5 retina ATTTTTTAAT (4) 1.8 0.0018 P2.5 retina GAGGGGGAGG (4) 1.8 0.0018 P4.5 retina GAAATGTAAG (6) 126.8 0.1268 P4.5 retina ATTTGTTATT (4) 5.9 0.0059 P4.5 retina AGCCAAACAA (5) 4 0.004 P4.5 retina ATCCATCTGT (4) 2 0.002 P4.5 retina GGTGGTGAAC (3) 2 0.002 P4.5 retina TAACCTAGGC (3) 2 0.002 P6.5 retina GAAATGTAAG (6) 145.1 0.1451 P6.5 retina AGCCAAACAA (5) 10 0.01 P6.5 retina ATTTGTTATT (4) 5 0.005 P6.5 retina ACAAACAAAA (3) 1.7 0.0017 P6.5 retina AGTGGATGAT (3) 1.7 0.0017 P6.5 retina ATTTTTTAAT (4) 1.7 0.0017 P6.5 retina GAATCCCAGC (8) 1.7 0.0017 P6.5 retina GAGGGGGAGG (4) 1.7 0.0017 P6.5 retina TTAAGTAAAA (4) 1.7 0.0017 P10.5 crx- retina GAAATGTAAG (6) 133.8 0.1338 P10.5 crx- retina ATTTGTTATT (4) 5.6 0.0056 P10.5 crx- retina CCACCTGTCT (5) 1.9 0.0019 P10.5 crx- retina GCAACACCGG (4) 1.9 0.0019 P10.5 crx- retina GGGAGCAGCT (2) 1.9 0.0019 P10.5 crx- retina TCAGGAGATT (4) 1.9 0.0019 P10.5 crx+ retina GAAATGTAAG (6) 96.1 0.0961 P10.5 crx+ retina AGCCAAACAA (5) 13.5 0.0135 P10.5 crx+ retina CTGTTAGTCG (4) 7.7 0.0077 P10.5 crx+ retina ATTTGTTATT (4) 3.8 0.0038 P10.5 crx+ retina TAACCTAGGC (3) 3.8 0.0038 P10.5 crx+ retina TCAGGAGATT (4) 3.8 0.0038 P10.5 crx+ retina AGAAGTAGTT 1.9 0.0019 P10.5 crx+ retina ATTCATCTGT (5) 1.9 0.0019 P10.5 crx+ retina GAATCCCAGC (8) 1.9 0.0019 P10.5 crx+ retina TTAAGTAAAA (4) 1.9 0.0019 Adult retinal GAAATGTAAG (6) 59.2 0.0592 Adult retinal AGCCAAACAA (5) 11.1 0.0111 Adult retinal GAATTTTTTT (5) 3.7 0.0037 Adult retinal AACTCTTGGC 1.9 0.0019 Adult retinal ACAAACAAAA (3) 1.9 0.0019 Adult retinal ATTTGTTATT (4) 1.9 0.0019 Adult retinal ATTTTGTAAT (2) 1.9 0.0019 Adult retinal GAAAGGAAGT (2) 1.9 0.0019 ONL GAAATGTAAG (6) 99.6 0.0996 ONL AGCCAAACAA (5) 7.7 0.0077 ONL AACTCTTGGC 5.7 0.0057 ONL CTGTTAGTCG (4) 5.7 0.0057 ONL AGAAGTAGTT 3.8 0.0038 ONL ATTTGTTATT (4) 1.9 0.0019 ONL GAATCCCAGC (8) 1.9 0.0019 ONL TAACCTAGGC (3) 1.9 0.0019