Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.23656	Prkwnk4	protein kinase, lysine deficient 4	11		69847
Gene Ontology	ATP binding | chloride ion homeostasis | chloride transport | cytoplasm | kinase activity | protein amino acid phosphorylation | protein binding | protein kinase activity | protein localization | protein serine/threonine kinase activity | tight junction | transferase activity
Human Homolog	PRKWNK4[protein kinase, lysine deficient 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCCAGAGA (4) 4.9 0.0049 P8 Cb GC TCTCCCGAAA (4) 4.9 0.0049 P8 Cb GC ACCGGGCTGG (5) 3.3 0.0033 P8 Cb GC TCTCCCAAAA (3) 3.3 0.0033 P8 Cb GC TCTCCCGAAG (2) 3.3 0.0033 P8 Cb GC ACTCATTTTA (3) 1.6 0.0016 Cb medulloblastoma TCTCCCGAAA (4) 23.1 0.0231 Cb medulloblastoma TCTCCCGAAG (2) 6.9 0.0069 Cb medulloblastoma ACCGGGCTGG (5) 2.3 0.0023 P8 GC+1d culture TCTCCCGAAA (4) 19.4 0.0194 P8 GC+1d culture ACCGGGCTGG (5) 3.4 0.0034 P8 GC+1d culture ACCGGCCTGG (5) 1.1 0.0011 P8 GC+1d culture TCTCCCGAAG (2) 1.1 0.0011 P8 GC+SHH+1d culture TCTCCCGAAA (4) 18.7 0.0187 P8 GC+SHH+1d culture ACCGGGCTGG (5) 4.7 0.0047 P8 GC+SHH+1d culture TCTCCCGAAG (2) 2.3 0.0023 3T3 fibroblasts ACCGGGCTGG (5) 17.5 0.0175 3T3 fibroblasts AAGCCAGAGA (4) 3.5 0.0035 3T3 fibroblasts ACCGGCCTGG (5) 3.5 0.0035 3T3 fibroblasts TCTCCCGAAA (4) 3.5 0.0035 E15 cortex ACCGGGCTGG (5) 9.9 0.0099 E15 cortex TCTCCCGAAA (4) 9.9 0.0099 P1 cortex ACCGGGCTGG (5) 4.5 0.0045 P1 cortex ATGCCTGGGA 4.5 0.0045 Hypothalamus TCTCCCGAAA (4) 25.4 0.0254 Hypothalamus TCTCCCGAAG (2) 7.2 0.0072 Hypothalamus ACCGGCCTGG (5) 3.6 0.0036 Hypothalamus ACTCATTTTA (3) 1.8 0.0018 E12.5 retina TCTCCCGAAA (4) 9.4 0.0094 E12.5 retina ACCGGGCTGG (5) 1.9 0.0019 E12.5 retina TCTCCCGAAG (2) 1.9 0.0019 E14.5 retina TCTCCCGAAA (4) 9.1 0.0091 E14.5 retina ACCGGGCTGG (5) 1.8 0.0018 E16.5 retina TCTCCCGAAA (4) 18.1 0.0181 E16.5 retina TCTCCCGAAG (2) 7.2 0.0072 E18.5 retina TCTCCCGAAA (4) 32.7 0.0327 E18.5 retina ACTCATTTTA (3) 1.8 0.0018 P0.5 retina TCTCCCGAAA (4) 11.8 0.0118 P0.5 retina ACCGGGCTGG (5) 3.9 0.0039 P0.5 retina TCTCCCAAAA (3) 2 0.002 P2.5 retina TCTCCCGAAA (4) 8.8 0.0088 P4.5 retina TCTCCCGAAA (4) 11.9 0.0119 P6.5 retina TCTCCCGAAA (4) 15 0.015 P6.5 retina ATGCCTGGGA 1.7 0.0017 P10.5 crx- retina TCTCCCGAAA (4) 7.4 0.0074 P10.5 crx- retina ACCGGGCTGG (5) 1.9 0.0019 P10.5 crx- retina ATGCCTGGGA 1.9 0.0019 P10.5 crx+ retina TCTCCCGAAA (4) 17.3 0.0173 P10.5 crx+ retina ACCGGGCTGG (5) 1.9 0.0019 P10.5 crx+ retina TCTCCCGAAG (2) 1.9 0.0019 Adult retinal TCTCCCGAAA (4) 7.4 0.0074 Adult retinal ACCGGGCTGG (5) 3.7 0.0037 Adult retinal TCTCCCAAAA (3) 1.9 0.0019 Adult retinal TCTCCCGAAG (2) 1.9 0.0019 ONL TCTCCCGAAA (4) 3.8 0.0038 ONL ACCGGCCTGG (5) 1.9 0.0019