Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.236587	D5Ertd606e	DNA segment, Chr 5, ERATO Doi 606, expressed	5	5 52.0 cM	52398
Gene Ontology	cell cycle | GTP binding
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 109 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAAAAAAAA (47) 17.9 0.0179 P8 Cb GC TTAGACACTT (2) 9.8 0.0098 P8 Cb GC TGAAGCAAAA (7) 3.3 0.0033 P8 Cb GC AAGCTGGGAG (3) 1.6 0.0016 P8 Cb GC TGCTTGTTAT 1.6 0.0016 Cb medulloblastoma AGAAAAAAAA (47) 53.2 0.0532 Cb medulloblastoma TAGAGAGGTG 6.9 0.0069 Cb medulloblastoma GCAATCCTAA 2.3 0.0023 Cb medulloblastoma TTAGACACTT (2) 2.3 0.0023 P8 GC+1d culture AGAAAAAAAA (47) 8 0.008 P8 GC+1d culture TAGAGAGGTG 8 0.008 P8 GC+1d culture TTAGACACTT (2) 8 0.008 P8 GC+1d culture ACCTCCAGGA (4) 4.6 0.0046 P8 GC+1d culture AAGCTGGGAG (3) 1.1 0.0011 P8 GC+1d culture GCAATCCTAA 1.1 0.0011 P8 GC+1d culture GCATCCTAAG (3) 1.1 0.0011 P8 GC+1d culture TAAGTACAGG 1.1 0.0011 P8 GC+1d culture TCTTTTTTTT (12) 1.1 0.0011 P8 GC+SHH+1d culture AGAAAAAAAA (47) 14.1 0.0141 P8 GC+SHH+1d culture TTAGACACTT (2) 9.4 0.0094 P8 GC+SHH+1d culture ACCTCCAGGA (4) 3.5 0.0035 P8 GC+SHH+1d culture TAGAGAGGTG 3.5 0.0035 P8 GC+SHH+1d culture TAAGTACAGG 2.3 0.0023 P8 GC+SHH+1d culture AAGCTGGGAG (3) 1.2 0.0012 P8 GC+SHH+1d culture TGGGATTTGA 1.2 0.0012 3T3 fibroblasts ACCTCCAGGA (4) 52.6 0.0526 3T3 fibroblasts TTAGACACTT (2) 14 0.014 3T3 fibroblasts ACCTACAGAG 7 0.007 3T3 fibroblasts TAAGTACAGG 7 0.007 3T3 fibroblasts AGAAAAAAAA (47) 3.5 0.0035 3T3 fibroblasts GCAATCCTAA 3.5 0.0035 E15 cortex AGAAAAAAAA (47) 14.8 0.0148 E15 cortex GCAATCCTAA 9.9 0.0099 E15 cortex ACCTACAGAG 4.9 0.0049 P1 cortex AGAAAAAAAA (47) 9.1 0.0091 P1 cortex TGCTTGTTAT 4.5 0.0045 Hypothalamus AGAAAAAAAA (47) 32.6 0.0326 Hypothalamus AAGCTGGGAG (3) 5.4 0.0054 Hypothalamus TAGAGAGGTG 3.6 0.0036 Hypothalamus TGGGATTTGA 3.6 0.0036 Hypothalamus CTCAGAAACA 1.8 0.0018 E12.5 retina AGAAAAAAAA (47) 20.7 0.0207 E12.5 retina TAAGTACAGG 9.4 0.0094 E12.5 retina ACCTCCAGGA (4) 5.6 0.0056 E12.5 retina TAGAGAGGTG 3.8 0.0038 E12.5 retina TGAAGCAAAA (7) 3.8 0.0038 E12.5 retina ACCTACAGAG 1.9 0.0019 E12.5 retina GCAATCCTAA 1.9 0.0019 E12.5 retina TGCTTGTTAT 1.9 0.0019 E12.5 retina TTAGACACTT (2) 1.9 0.0019 E14.5 retina AGAAAAAAAA (47) 20 0.02 E14.5 retina TGAAGCAAAA (7) 3.6 0.0036 E14.5 retina TTAGACACTT (2) 3.6 0.0036 E14.5 retina ACCTACAGAG 1.8 0.0018 E14.5 retina GCATCCTAAG (3) 1.8 0.0018 E14.5 retina TGGGATTTGA 1.8 0.0018 E16.5 retina AGAAAAAAAA (47) 10.9 0.0109 E16.5 retina ACCTACAGAG 1.8 0.0018 E16.5 retina TAGAGAGGTG 1.8 0.0018 E16.5 retina TTAGACACTT (2) 1.8 0.0018 E18.5 retina AGAAAAAAAA (47) 29.1 0.0291 E18.5 retina TGAAGCAAAA (7) 5.5 0.0055 E18.5 retina ACCTCCAGGA (4) 3.6 0.0036 E18.5 retina AAGCTGGGAG (3) 1.8 0.0018 E18.5 retina CTCAGAAACA 1.8 0.0018 P0.5 retina AGAAAAAAAA (47) 13.7 0.0137 P0.5 retina GCATCCTAAG (3) 2 0.002 P0.5 retina TTAGACACTT (2) 2 0.002 P2.5 retina AGAAAAAAAA (47) 17.6 0.0176 P2.5 retina TAGAGAGGTG 7 0.007 P2.5 retina TAAGTACAGG 3.5 0.0035 P2.5 retina TGAAGCAAAA (7) 3.5 0.0035 P2.5 retina ACCTACAGAG 1.8 0.0018 P2.5 retina TTAGACACTT (2) 1.8 0.0018 P4.5 retina AGAAAAAAAA (47) 31.7 0.0317 P4.5 retina TAAGTACAGG 4 0.004 P4.5 retina AAGCTGGGAG (3) 2 0.002 P4.5 retina ACCTCCAGGA (4) 2 0.002 P4.5 retina TAGAGAGGTG 2 0.002 P6.5 retina AGAAAAAAAA (47) 13.3 0.0133 P6.5 retina TGCTTGTTAT 5 0.005 P6.5 retina AAGCTGGGAG (3) 3.3 0.0033 P6.5 retina CTCAGAAACA 1.7 0.0017 P6.5 retina TAGAGAGGTG 1.7 0.0017 P6.5 retina TTAGACACTT (2) 1.7 0.0017 P10.5 crx- retina AGAAAAAAAA (47) 7.4 0.0074 P10.5 crx- retina CTGGCCTTTC (4) 3.7 0.0037 P10.5 crx- retina TCTTTTTTTT (12) 3.7 0.0037 P10.5 crx- retina ACCTACAGAG 1.9 0.0019 P10.5 crx- retina ACCTCCAGGA (4) 1.9 0.0019 P10.5 crx- retina GCAATCCTAA 1.9 0.0019 P10.5 crx- retina TAGAGAGGTG 1.9 0.0019 P10.5 crx+ retina AGAAAAAAAA (47) 5.8 0.0058 P10.5 crx+ retina TGCTTGTTAT 3.8 0.0038 P10.5 crx+ retina AAGCTGGGAG (3) 1.9 0.0019 P10.5 crx+ retina CTGGCCTTTC (4) 1.9 0.0019 P10.5 crx+ retina GCATCCTAAG (3) 1.9 0.0019 P10.5 crx+ retina TAGAGAGGTG 1.9 0.0019 P10.5 crx+ retina TGGGATTTGA 1.9 0.0019 Adult retinal AGAAAAAAAA (47) 5.6 0.0056 Adult retinal TAGAGAGGTG 5.6 0.0056 Adult retinal ACCTCCAGGA (4) 3.7 0.0037 Adult retinal TGCTTGTTAT 3.7 0.0037 Adult retinal AAGCTGGGAG (3) 1.9 0.0019 ONL AGAAAAAAAA (47) 19.2 0.0192 ONL ACCTCCAGGA (4) 3.8 0.0038 ONL TCTTTTTTTT (12) 3.8 0.0038 ONL GCATCCTAAG (3) 1.9 0.0019 ONL TAAGTACAGG 1.9 0.0019