Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.23713
2210008M09Rik
RIKEN cDNA 2210008M09 gene
4
207920
Human Homolog
FLJ20171[hypothetical protein FLJ20171]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 68 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGCAAGCCCC (
6
)
215.3
0.2153
P8 Cb GC
TTTCTTTGGT (
3
)
9.8
0.0098
P8 Cb GC
AAGGACAGCA (
5
)
1.6
0.0016
P8 Cb GC
AGGGGGCTCC
(
4
)
1.6
0.0016
Cb medulloblastoma
GGCAAGCCCC (
6
)
69.4
0.0694
Cb medulloblastoma
TTTCTTTGGT (
3
)
4.6
0.0046
P8 GC+1d culture
GGCAAGCCCC (
6
)
137
0.137
P8 GC+1d culture
TTTCTTTGGT (
3
)
4.6
0.0046
P8 GC+1d culture
AGGGGGCTCC
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GGCAAGCCCC (
6
)
196.7
0.1967
P8 GC+SHH+1d culture
TTTCTTTGGT (
3
)
7
0.007
P8 GC+SHH+1d culture
AGGGGGCTCC
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGGCCTGAG
(
4
)
1.2
0.0012
3T3 fibroblasts
GGCAAGCCCC (
6
)
389.1
0.3891
3T3 fibroblasts
AGGGGGCTCC
(
4
)
3.5
0.0035
3T3 fibroblasts
ATTTGATGTG
(
5
)
3.5
0.0035
E15 cortex
GGCAAGCCCC (
6
)
183.1
0.1831
E15 cortex
AGGGGGCTCC
(
4
)
4.9
0.0049
P1 cortex
GGCAAGCCCC (
6
)
86.4
0.0864
P1 cortex
TTTCTTTGGT (
3
)
9.1
0.0091
P1 cortex
AAGGACAGCA (
5
)
4.5
0.0045
P1 cortex
GATACCAGGG (
4
)
4.5
0.0045
Hypothalamus
GGCAAGCCCC (
6
)
103.2
0.1032
Hypothalamus
AGGGGGCTCC
(
4
)
1.8
0.0018
Hypothalamus
CGTGTGGCTT (
3
)
1.8
0.0018
Hypothalamus
TTTCTTTGGT (
3
)
1.8
0.0018
E12.5 retina
GGCAAGCCCC (
6
)
405.5
0.4055
E12.5 retina
AAGGACAGCA (
5
)
1.9
0.0019
E12.5 retina
GATACCAGGG (
4
)
1.9
0.0019
E14.5 retina
GGCAAGCCCC (
6
)
428.2
0.4282
E14.5 retina
GATACCAGGG (
4
)
5.5
0.0055
E14.5 retina
AGGGGGCTCC
(
4
)
1.8
0.0018
E14.5 retina
ATTTGATGTG
(
5
)
1.8
0.0018
E14.5 retina
CGTGTGGCTT (
3
)
1.8
0.0018
E16.5 retina
GGCAAGCCCC (
6
)
594.1
0.5941
E16.5 retina
AGGGGGCTCC
(
4
)
3.6
0.0036
E16.5 retina
TTTCTTTGGT (
3
)
3.6
0.0036
E16.5 retina
GATACCAGGG (
4
)
1.8
0.0018
E18.5 retina
GGCAAGCCCC (
6
)
372.9
0.3729
E18.5 retina
AGGGGGCTCC
(
4
)
3.6
0.0036
E18.5 retina
ATTTGATGTG
(
5
)
1.8
0.0018
E18.5 retina
CTGGCCTGAG
(
4
)
1.8
0.0018
E18.5 retina
TTTCTTTGGT (
3
)
1.8
0.0018
P0.5 retina
GGCAAGCCCC (
6
)
237.5
0.2375
P0.5 retina
AGGGGGCTCC
(
4
)
3.9
0.0039
P0.5 retina
TTTCTTTGGT (
3
)
3.9
0.0039
P0.5 retina
ATTTGATGTG
(
5
)
2
0.002
P2.5 retina
GGCAAGCCCC (
6
)
256.9
0.2569
P2.5 retina
TTTCTTTGGT (
3
)
1.8
0.0018
P4.5 retina
GGCAAGCCCC (
6
)
328.9
0.3289
P6.5 retina
GGCAAGCCCC (
6
)
275.1
0.2751
P6.5 retina
ATTTGATGTG
(
5
)
3.3
0.0033
P6.5 retina
TTTCTTTGGT (
3
)
3.3
0.0033
P6.5 retina
AGGGGGCTCC
(
4
)
1.7
0.0017
P10.5 crx- retina
GGCAAGCCCC (
6
)
436.6
0.4366
P10.5 crx- retina
AGGGGGCTCC
(
4
)
5.6
0.0056
P10.5 crx- retina
CGTGTGGCTT (
3
)
1.9
0.0019
P10.5 crx+ retina
GGCAAGCCCC (
6
)
344.1
0.3441
P10.5 crx+ retina
TTTCTTTGGT (
3
)
3.8
0.0038
P10.5 crx+ retina
ATTTGATGTG
(
5
)
1.9
0.0019
P10.5 crx+ retina
CGTGTGGCTT (
3
)
1.9
0.0019
Adult retinal
GGCAAGCCCC (
6
)
122.2
0.1222
Adult retinal
AGGGGGCTCC
(
4
)
3.7
0.0037
Adult retinal
ATTTGATGTG
(
5
)
1.9
0.0019
Adult retinal
TTTCTTTGGT (
3
)
1.9
0.0019
ONL
GGCAAGCCCC (
6
)
122.6
0.1226
ONL
ATTTGATGTG
(
5
)
1.9
0.0019
ONL
CTGGCCTGAG
(
4
)
1.9
0.0019
