Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.237594
Ufd1l
ubiquitin fusion degradation 1 like
16
16 11.75 cM
22230
Mm.237594
D630030B22Rik
RIKEN cDNA D630030B22 gene
16
53963
Mm.237594
9430099O15Rik
RIKEN cDNA 9430099O15 gene
16
53965
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 74 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AACGAGGAAT (
4
)
42.4
0.0424
P8 Cb GC
GTGGCTCAAA (
13
)
9.8
0.0098
P8 Cb GC
CTGATCCAGC
(
4
)
4.9
0.0049
P8 Cb GC
GAATAAAGTG
(
4
)
1.6
0.0016
P8 Cb GC
GCTCAAAAAA
(
11
)
1.6
0.0016
Cb medulloblastoma
AACGAGGAAT (
4
)
201.2
0.2012
Cb medulloblastoma
CTGATCCAGC
(
4
)
9.2
0.0092
Cb medulloblastoma
GTGGCTCAAA (
13
)
6.9
0.0069
Cb medulloblastoma
GGGCTGGGAA (
10
)
4.6
0.0046
Cb medulloblastoma
GCTCAAAAAA
(
11
)
2.3
0.0023
P8 GC+1d culture
GTGGCTCAAA (
13
)
13.7
0.0137
P8 GC+1d culture
CTGATCCAGC
(
4
)
5.7
0.0057
P8 GC+1d culture
GCTCAAAAAA
(
11
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGATCCAGC
(
4
)
8.2
0.0082
P8 GC+SHH+1d culture
GTGGCTCAAA (
13
)
7
0.007
P8 GC+SHH+1d culture
GCTCAAAAAA
(
11
)
2.3
0.0023
3T3 fibroblasts
GTGGCTCAAA (
13
)
10.5
0.0105
3T3 fibroblasts
CTGATCCAGC
(
4
)
3.5
0.0035
3T3 fibroblasts
GAATAAAGTG
(
4
)
3.5
0.0035
E15 cortex
GTGGCTCAAA (
13
)
19.8
0.0198
E15 cortex
CTGATCCAGC
(
4
)
14.8
0.0148
E15 cortex
AACGAGGAAT (
4
)
4.9
0.0049
P1 cortex
GTGGCTCAAA (
13
)
18.2
0.0182
P1 cortex
CTGATCCAGC
(
4
)
4.5
0.0045
P1 cortex
GAATAAAGTG
(
4
)
4.5
0.0045
P1 cortex
GGGCTGGGAA (
10
)
4.5
0.0045
Hypothalamus
CTGATCCAGC
(
4
)
5.4
0.0054
Hypothalamus
GTGGCTCAAA (
13
)
5.4
0.0054
Hypothalamus
GCTCAAAAAA
(
11
)
1.8
0.0018
Hypothalamus
TATTTCTAGA (
6
)
1.8
0.0018
E12.5 retina
GTGGCTCAAA (
13
)
11.3
0.0113
E12.5 retina
CTGATCCAGC
(
4
)
5.6
0.0056
E12.5 retina
TGTGAAGTCC (
4
)
1.9
0.0019
E14.5 retina
GTGGCTCAAA (
13
)
18.2
0.0182
E14.5 retina
CTGATCCAGC
(
4
)
10.9
0.0109
E14.5 retina
GCTCAAAAAA
(
11
)
3.6
0.0036
E16.5 retina
CTGATCCAGC
(
4
)
10.9
0.0109
E16.5 retina
GTGGCTCAAA (
13
)
9.1
0.0091
E16.5 retina
GAATAAAGTG
(
4
)
1.8
0.0018
E16.5 retina
GCTCAAAAAA
(
11
)
1.8
0.0018
E16.5 retina
TATTTCTAGA (
6
)
1.8
0.0018
E16.5 retina
TGTGAAGTCC (
4
)
1.8
0.0018
E18.5 retina
CTGATCCAGC
(
4
)
10.9
0.0109
E18.5 retina
AACGAGGAAT (
4
)
7.3
0.0073
E18.5 retina
GTGGCTCAAA (
13
)
5.5
0.0055
E18.5 retina
GCTCAAAAAA
(
11
)
1.8
0.0018
P0.5 retina
GTGGCTCAAA (
13
)
17.7
0.0177
P0.5 retina
CTGATCCAGC
(
4
)
7.9
0.0079
P0.5 retina
GAATAAAGTG
(
4
)
2
0.002
P2.5 retina
CTGATCCAGC
(
4
)
10.6
0.0106
P2.5 retina
GTGGCTCAAA (
13
)
10.6
0.0106
P2.5 retina
GAATAAAGTG
(
4
)
1.8
0.0018
P4.5 retina
CTGATCCAGC
(
4
)
7.9
0.0079
P4.5 retina
GTGGCTCAAA (
13
)
7.9
0.0079
P4.5 retina
AACGAGGAAT (
4
)
2
0.002
P6.5 retina
GTGGCTCAAA (
13
)
11.7
0.0117
P6.5 retina
CTGATCCAGC
(
4
)
10
0.01
P6.5 retina
GCTCAAAAAA
(
11
)
6.7
0.0067
P6.5 retina
GAATAAAGTG
(
4
)
1.7
0.0017
P10.5 crx- retina
CTGATCCAGC
(
4
)
7.4
0.0074
P10.5 crx- retina
GTGGCTCAAA (
13
)
3.7
0.0037
P10.5 crx- retina
AACGAGGAAT (
4
)
1.9
0.0019
P10.5 crx+ retina
AACGAGGAAT (
4
)
23.1
0.0231
P10.5 crx+ retina
GTGGCTCAAA (
13
)
7.7
0.0077
P10.5 crx+ retina
CTGATCCAGC
(
4
)
5.8
0.0058
P10.5 crx+ retina
TGTGAAGTCC (
4
)
1.9
0.0019
Adult retinal
CTGATCCAGC
(
4
)
16.7
0.0167
Adult retinal
GCTCAAAAAA
(
11
)
1.9
0.0019
Adult retinal
GTGGCTCAAA (
13
)
1.9
0.0019
ONL
CTGATCCAGC
(
4
)
5.7
0.0057
ONL
GTGGCTCAAA (
13
)
5.7
0.0057
ONL
AACGAGGAAT (
4
)
1.9
0.0019
ONL
GCTCAAAAAA
(
11
)
1.9
0.0019
ONL
TATTTCTAGA (
6
)
1.9
0.0019
