Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.237825	Bmpr1a	bone morphogenetic protein receptor, type 1A	14	14 13.0 cM	12166
Gene Ontology	anterior/posterior pattern formation | ATP binding | ectoderm development | endoderm development | extracellular space | integral to membrane | kinase activity | membrane | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | transferase activity | transforming growth factor beta receptor activity | transforming growth factor beta receptor signaling pathway | transmembrane receptor protein serine/threonine kinase activity
Human Homolog	BMPR1A[bone morphogenetic protein receptor, type IA]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGAAAAAAA (22) 4.9 0.0049 P8 Cb GC TGAGCATCAA (2) 4.9 0.0049 P8 Cb GC TTGAAAAAAA (15) 4.9 0.0049 P8 Cb GC TAAAGTGTCC (5) 1.6 0.0016 P8 Cb GC TGAAAAGAAA (6) 1.6 0.0016 Cb medulloblastoma GTGAAAAAAA (22) 43.9 0.0439 Cb medulloblastoma TGAGCATCAA (2) 6.9 0.0069 Cb medulloblastoma TAAAGTGTCC (5) 4.6 0.0046 Cb medulloblastoma TGAAAAGAAA (6) 2.3 0.0023 Cb medulloblastoma TTGAAAAAAA (15) 2.3 0.0023 P8 GC+1d culture GTGAAAAAAA (22) 6.8 0.0068 P8 GC+1d culture TGAGCATCAA (2) 6.8 0.0068 P8 GC+1d culture TAAAGTGTCC (5) 2.3 0.0023 P8 GC+1d culture TGAAAAGAAA (6) 2.3 0.0023 P8 GC+1d culture TAGATGCCCA (2) 1.1 0.0011 P8 GC+1d culture TCATTCTTTA (2) 1.1 0.0011 P8 GC+1d culture TTGAAAAAAA (15) 1.1 0.0011 P8 GC+SHH+1d culture GTGAAAAAAA (22) 10.5 0.0105 P8 GC+SHH+1d culture TTGAAAAAAA (15) 9.4 0.0094 P8 GC+SHH+1d culture TGAGCATCAA (2) 4.7 0.0047 P8 GC+SHH+1d culture GCGAAGGGAG (2) 2.3 0.0023 P8 GC+SHH+1d culture TAAAGTGTCC (5) 2.3 0.0023 P8 GC+SHH+1d culture TGAAAAGAAA (6) 1.2 0.0012 3T3 fibroblasts AGCCACCAGG (6) 3.5 0.0035 3T3 fibroblasts GCGAAGGGAG (2) 3.5 0.0035 E15 cortex TGAAAAGAAA (6) 4.9 0.0049 E15 cortex TGAGCATCAA (2) 4.9 0.0049 P1 cortex CATTTTAAAA (8) 4.5 0.0045 P1 cortex TGAAAAGAAA (6) 4.5 0.0045 Hypothalamus GTGAAAAAAA (22) 18.1 0.0181 Hypothalamus TGAGCATCAA (2) 9.1 0.0091 Hypothalamus TCATTCTTTA (2) 1.8 0.0018 Hypothalamus TGAAAAGAAA (6) 1.8 0.0018 E12.5 retina GTGAAAAAAA (22) 11.3 0.0113 E12.5 retina TGAGCATCAA (2) 7.5 0.0075 E12.5 retina TAGATGCCCA (2) 1.9 0.0019 E12.5 retina TCATTCTTTA (2) 1.9 0.0019 E12.5 retina TTGAAAAAAA (15) 1.9 0.0019 E14.5 retina GTGAAAAAAA (22) 12.8 0.0128 E14.5 retina TGAGCATCAA (2) 7.3 0.0073 E14.5 retina TAAAGTGTCC (5) 1.8 0.0018 E16.5 retina TGAGCATCAA (2) 9.1 0.0091 E16.5 retina GTGAAAAAAA (22) 5.4 0.0054 E16.5 retina TAAAGTGTCC (5) 1.8 0.0018 E16.5 retina TACTCCACAA (2) 1.8 0.0018 E18.5 retina GTGAAAAAAA (22) 20 0.02 E18.5 retina TGAGCATCAA (2) 10.9 0.0109 E18.5 retina TTGAAAAAAA (15) 5.5 0.0055 E18.5 retina CATTTTAAAA (8) 1.8 0.0018 P0.5 retina GTGAAAAAAA (22) 7.9 0.0079 P0.5 retina TGAGCATCAA (2) 7.9 0.0079 P0.5 retina TGAAAAGAAA (6) 3.9 0.0039 P0.5 retina TTGAAAAAAA (15) 3.9 0.0039 P0.5 retina CATTTTAAAA (8) 2 0.002 P0.5 retina TAAAGTGTCC (5) 2 0.002 P2.5 retina GTGAAAAAAA (22) 10.6 0.0106 P2.5 retina TGAGCATCAA (2) 7 0.007 P2.5 retina TAAAGTGTCC (5) 3.5 0.0035 P2.5 retina TGAAAAGAAA (6) 3.5 0.0035 P2.5 retina TAGATGCCCA (2) 1.8 0.0018 P4.5 retina GTGAAAAAAA (22) 23.8 0.0238 P4.5 retina TTGAAAAAAA (15) 7.9 0.0079 P4.5 retina CATTTTAAAA (8) 5.9 0.0059 P4.5 retina TGAGCATCAA (2) 4 0.004 P6.5 retina TGAGCATCAA (2) 6.7 0.0067 P6.5 retina GTGAAAAAAA (22) 5 0.005 P6.5 retina TAAAGTGTCC (5) 1.7 0.0017 P10.5 crx- retina TGAGCATCAA (2) 5.6 0.0056 P10.5 crx- retina CATTTTAAAA (8) 3.7 0.0037 P10.5 crx- retina GTGAAAAAAA (22) 3.7 0.0037 P10.5 crx- retina TTGAAAAAAA (15) 1.9 0.0019 P10.5 crx+ retina GTGAAAAAAA (22) 5.8 0.0058 P10.5 crx+ retina TGAGCATCAA (2) 5.8 0.0058 P10.5 crx+ retina AGCCACCAGG (6) 1.9 0.0019 P10.5 crx+ retina TAAAGTGTCC (5) 1.9 0.0019 P10.5 crx+ retina TACTCCACAA (2) 1.9 0.0019 P10.5 crx+ retina TGAAAAGAAA (6) 1.9 0.0019 Adult retinal GTGAAAAAAA (22) 3.7 0.0037 Adult retinal AGCCACCAGG (6) 1.9 0.0019 Adult retinal CATTTTAAAA (8) 1.9 0.0019 Adult retinal TGAGCATCAA (2) 1.9 0.0019 Adult retinal TTGAAAAAAA (15) 1.9 0.0019 ONL TGAGCATCAA (2) 7.7 0.0077 ONL GTGAAAAAAA (22) 5.7 0.0057 ONL TACTCCACAA (2) 3.8 0.0038 ONL TTGAAAAAAA (15) 3.8 0.0038