Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.23793	4933408M05Rik	RIKEN cDNA 4933408M05 gene	5		74449
Mm.23793	Cnga1	cyclic nucleotide gated channel alpha 1	4	5 41.0 cM	12788
Gene Ontology	3',5'-cGMP binding | integral to membrane | ion channel activity | ion transport | membrane | potassium channel activity | potassium ion transport | vision
Human Homolog	CNGA1[cyclic nucleotide gated channel alpha 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 23 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTGATGAA (2) 1.6 0.0016 Cb medulloblastoma ATACAGACAT (3) 2.3 0.0023 Cb medulloblastoma GAGGGAAAAA (7) 2.3 0.0023 P8 GC+1d culture ATACAGACAT (3) 1.1 0.0011 P8 GC+1d culture GTTTTGATGA (2) 1.1 0.0011 P8 GC+SHH+1d culture ATACAGACAT (3) 1.2 0.0012 E12.5 retina GAGGGAAAAA (7) 1.9 0.0019 P0.5 retina ATACAGACAT (3) 2 0.002 P0.5 retina GTTTTGATGA (2) 2 0.002 P2.5 retina ATACAGACAT (3) 1.8 0.0018 P2.5 retina GTTTTGATGA (2) 1.8 0.0018 P2.5 retina TTTTGATGAA (2) 1.8 0.0018 P6.5 retina CACGGTGTGT (2) 5 0.005 P6.5 retina AAGACAAATA (3) 1.7 0.0017 P6.5 retina GAGGGAAAAA (7) 1.7 0.0017 P10.5 crx- retina AAGACAAATA (3) 3.7 0.0037 P10.5 crx- retina CACGGTGTGT (2) 3.7 0.0037 P10.5 crx+ retina CACGGTGTGT (2) 11.5 0.0115 Adult retinal CACGGTGTGT (2) 40.7 0.0407 Adult retinal AAGACAAATA (3) 7.4 0.0074 ONL CACGGTGTGT (2) 17.2 0.0172 ONL AAGACAAATA (3) 3.8 0.0038 ONL TTTTGATGAA (2) 1.9 0.0019