Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.238038
Mkln1
muskelin 1, intracellular mediator containing kelch motifs
6
27418
Mm.238038
A130067F06Rik
RIKEN cDNA A130067F06 gene
6
319270
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 63 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
CCTTTGATCC (
22
)
3.3
0.0033
P8 Cb GC
TGGGCCAGAC (
3
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
CCTTTGATCC (
22
)
2.3
0.0023
Cb medulloblastoma
GAGAAGGAAC
(
10
)
2.3
0.0023
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
GAGAAGGAAC
(
10
)
2.3
0.0023
P8 GC+1d culture
CCTTTGATCC (
22
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
GAGAAGGAAC
(
10
)
3.5
0.0035
P8 GC+SHH+1d culture
CCTTTGATCC (
22
)
1.2
0.0012
P8 GC+SHH+1d culture
GTTATCCAAA
(
2
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
GAGAAGGAAC
(
10
)
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
CCTTTGATCC (
22
)
13.6
0.0136
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
TATTTCTAGA
(
6
)
1.8
0.0018
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
CCTTTGATCC (
22
)
5.6
0.0056
E12.5 retina
GAGAAGGAAC
(
10
)
1.9
0.0019
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
CCTTTGATCC (
22
)
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
GAGAAGGAAC
(
10
)
5.4
0.0054
E16.5 retina
CCTTTGATCC (
22
)
3.6
0.0036
E16.5 retina
GTTATCCAAA
(
2
)
1.8
0.0018
E16.5 retina
TATTTCTAGA
(
6
)
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
CCTTTGATCC (
22
)
1.8
0.0018
E18.5 retina
TCTGCAACTT (
3
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
CCTTTGATCC (
22
)
2
0.002
P0.5 retina
TGGGCCAGAC (
3
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
CCTTTGATCC (
22
)
7
0.007
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
CCTTTGATCC (
22
)
5.9
0.0059
P4.5 retina
GAGAAGGAAC
(
10
)
2
0.002
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
CCTTTGATCC (
22
)
3.3
0.0033
P6.5 retina
GAGAAGGAAC
(
10
)
3.3
0.0033
P6.5 retina
GTTATCCAAA
(
2
)
1.7
0.0017
P6.5 retina
TGGGCCAGAC (
3
)
1.7
0.0017
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
GAGAAGGAAC
(
10
)
3.7
0.0037
P10.5 crx- retina
TCTGCAACTT (
3
)
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
CCTTTGATCC (
22
)
5.8
0.0058
P10.5 crx+ retina
GAGAAGGAAC
(
10
)
3.8
0.0038
P10.5 crx+ retina
GTTATCCAAA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TCTGCAACTT (
3
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
GAGAAGGAAC
(
10
)
1.9
0.0019
Adult retinal
GTTATCCAAA
(
2
)
1.9
0.0019
Adult retinal
TCTGCAACTT (
3
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
CCTTTGATCC (
22
)
5.7
0.0057
ONL
GAGAAGGAAC
(
10
)
1.9
0.0019
ONL
TATTTCTAGA
(
6
)
1.9
0.0019
ONL
TCTGCAACTT (
3
)
1.9
0.0019
