Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.23879	9330180L10Rik	RIKEN cDNA 9330180L10 gene	5		100752
Mm.23879	Sbno1	sno, strawberry notch homolog 1 (Drosophila)	5		243272
Gene Ontology	nucleic acid binding
Human Homolog	SBNO1[sno, strawberry notch homolog 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGAGAAACA (7) 3.3 0.0033 P8 Cb GC AAACTGAAGC (9) 1.6 0.0016 P8 Cb GC AAGCTGAAGC (9) 1.6 0.0016 P8 Cb GC GAGATGTCTG (3) 1.6 0.0016 Cb medulloblastoma GGGTGCATCT (6) 4.6 0.0046 Cb medulloblastoma GAAAGTACTC (2) 2.3 0.0023 Cb medulloblastoma TGAGGATCGA (2) 2.3 0.0023 Cb medulloblastoma TTGAAAATTG (5) 2.3 0.0023 P8 GC+1d culture GAAAGTACTC (2) 5.7 0.0057 P8 GC+1d culture GGGGTACCCC (7) 4.6 0.0046 P8 GC+1d culture GGTAAGTTTT (12) 3.4 0.0034 P8 GC+1d culture GCTGCAGCTG (8) 1.1 0.0011 P8 GC+SHH+1d culture GAAAGTACTC (2) 3.5 0.0035 P8 GC+SHH+1d culture GGTAAGTTTT (12) 3.5 0.0035 P8 GC+SHH+1d culture AAACTGAAGC (9) 1.2 0.0012 P8 GC+SHH+1d culture AGCTCTGGGG (5) 1.2 0.0012 P8 GC+SHH+1d culture GAGAGAAACA (7) 1.2 0.0012 P8 GC+SHH+1d culture GGGGTACCCC (7) 1.2 0.0012 P8 GC+SHH+1d culture GGGTGCATCT (6) 1.2 0.0012 P8 GC+SHH+1d culture TGAGGATCGA (2) 1.2 0.0012 3T3 fibroblasts AGCTCTGGGG (5) 10.5 0.0105 3T3 fibroblasts AAGCTGAAGC (9) 3.5 0.0035 3T3 fibroblasts GGGGTACCCC (7) 3.5 0.0035 E15 cortex GGTAAGTTTT (12) 4.9 0.0049 P1 cortex AGCTCTGGGG (5) 9.1 0.0091 P1 cortex GGTAAGTTTT (12) 9.1 0.0091 P1 cortex ACAGCACAGC (6) 4.5 0.0045 Hypothalamus AAGCTGAAGC (9) 1.8 0.0018 Hypothalamus ACAGCACAGC (6) 1.8 0.0018 Hypothalamus GGGGTACCCC (7) 1.8 0.0018 Hypothalamus GGTAAGTTTT (12) 1.8 0.0018 Hypothalamus TTGAAAATTG (5) 1.8 0.0018 E12.5 retina AGCTCTGGGG (5) 3.8 0.0038 E12.5 retina AAGCTGAAGC (9) 1.9 0.0019 E12.5 retina GAAAGTACTC (2) 1.9 0.0019 E12.5 retina GGGGTACCCC (7) 1.9 0.0019 E14.5 retina GGGGTACCCC (7) 5.5 0.0055 E14.5 retina AGCTCTGGGG (5) 3.6 0.0036 E14.5 retina GGTAAGTTTT (12) 1.8 0.0018 E16.5 retina GGGGTACCCC (7) 9.1 0.0091 E16.5 retina GCTGCAGCTG (8) 3.6 0.0036 E16.5 retina ACAGCACAGC (6) 1.8 0.0018 E16.5 retina GAGATGTCTG (3) 1.8 0.0018 E18.5 retina GGGGTACCCC (7) 1.8 0.0018 E18.5 retina GGTAAGTTTT (12) 1.8 0.0018 P0.5 retina GGGGTACCCC (7) 3.9 0.0039 P0.5 retina ACAGCACAGC (6) 2 0.002 P0.5 retina AGCTCTGGGG (5) 2 0.002 P0.5 retina GAAAGTACTC (2) 2 0.002 P0.5 retina GGTAAGTTTT (12) 2 0.002 P2.5 retina AAACTGAAGC (9) 1.8 0.0018 P2.5 retina GAAAGTACTC (2) 1.8 0.0018 P2.5 retina GAGAGAAACA (7) 1.8 0.0018 P2.5 retina GGGGTACCCC (7) 1.8 0.0018 P2.5 retina GGTAAGTTTT (12) 1.8 0.0018 P4.5 retina GAAAGTACTC (2) 4 0.004 P4.5 retina GGTAAGTTTT (12) 4 0.004 P4.5 retina AGCTCTGGGG (5) 2 0.002 P4.5 retina TGAGGATCGA (2) 2 0.002 P4.5 retina TTGAAAATTG (5) 2 0.002 P6.5 retina AGCTCTGGGG (5) 3.3 0.0033 P6.5 retina GCTGCAGCTG (8) 1.7 0.0017 P10.5 crx- retina GAAAGTACTC (2) 5.6 0.0056 P10.5 crx- retina GAGATGTCTG (3) 3.7 0.0037 P10.5 crx- retina GGTAAGTTTT (12) 3.7 0.0037 P10.5 crx- retina GGGGTACCCC (7) 1.9 0.0019 P10.5 crx- retina TTGAAAATTG (5) 1.9 0.0019 P10.5 crx+ retina GAAAGTACTC (2) 11.5 0.0115 P10.5 crx+ retina ACAGCACAGC (6) 1.9 0.0019 P10.5 crx+ retina AGCTCTGGGG (5) 1.9 0.0019 Adult retinal GAAAGTACTC (2) 3.7 0.0037 Adult retinal GGTAAGTTTT (12) 3.7 0.0037 Adult retinal AAGCTGAAGC (9) 1.9 0.0019 Adult retinal ACAGCACAGC (6) 1.9 0.0019 Adult retinal AGCTCTGGGG (5) 1.9 0.0019 Adult retinal GCTGCAGCTG (8) 1.9 0.0019 ONL GAAAGTACTC (2) 5.7 0.0057 ONL TTGAAAATTG (5) 3.8 0.0038 ONL GAGAGAAACA (7) 1.9 0.0019 ONL GCTGCAGCTG (8) 1.9 0.0019 ONL GGGGTACCCC (7) 1.9 0.0019