Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.239141	Bcl10	B-cell leukemia/lymphoma 10	3		12042
Gene Ontology	apoptosis | apoptosis | caspase activation | caspase activator activity | cellular defense response (sensu Vertebrata) | cytoplasm | cytoplasm | humoral defense mechanism (sensu Vertebrata) | intracellular | lipid raft | negative regulation of cell cycle | NIK-I-kappaB/NF-kappaB cascade | NIK-I-kappaB/NF-kappaB cascade | protein binding | regulation of apoptosis
Human Homolog	BCL10[B-cell CLL/lymphoma 10]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC GTGAGCAGCG (2) 4.9 0.0049 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma GTGAGCAGCG (2) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TCAGCGCTCT 3.4 0.0034 P8 GC+1d culture GTGAGCAGCG (2) 1.1 0.0011 P8 GC+1d culture GTGGTCGTGA 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture GTGAGCAGCG (2) 3.5 0.0035 P8 GC+SHH+1d culture GAGGCTCGCG (2) 2.3 0.0023 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts TCAGCGCTCT 3.5 0.0035 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex GTGAGCAGCG (2) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus GTGAGCAGCG (2) 3.6 0.0036 Hypothalamus GTGGTCGTGA 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina GTGAGCAGCG (2) 1.8 0.0018 E14.5 retina GTGGTCGTGA 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina GAGGCTCGCG (2) 1.8 0.0018 E18.5 retina GTGAGCAGCG (2) 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina GTGGTCGTGA 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina GTGAGCAGCG (2) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina GTGAGCAGCG (2) 1.7 0.0017 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina GTGAGCAGCG (2) 5.6 0.0056 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina GAGGCTCGCG (2) 1.9 0.0019 P10.5 crx+ retina GTGAGCAGCG (2) 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal GAGGCTCGCG (2) 3.7 0.0037 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TCAGCGCTCT 1.9 0.0019