Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.239183
1110007F05Rik
RIKEN cDNA 1110007F05 gene
4
71787
Human Homolog
SECP43[tRNA selenocysteine associated protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
GAGCAGAGCG
(
2
)
6.9
0.0069
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
GAGCAGAGCG
(
2
)
6.8
0.0068
P8 GC+1d culture
CTAGGCAAAC (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
GAGCAGAGCG
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
CTAGGCAAAC (
7
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
CTAGGCAAAC (
7
)
3.5
0.0035
3T3 fibroblasts
GAGCAGAGCG
(
2
)
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
CTAGGCAAAC (
7
)
4.9
0.0049
E15 cortex
GAGCAGAGCG
(
2
)
4.9
0.0049
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
CTAGGCAAAC (
7
)
9.1
0.0091
P1 cortex
GAGCAGAGCG
(
2
)
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
GAGCAGAGCG
(
2
)
3.8
0.0038
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
GAGCAGAGCG
(
2
)
1.8
0.0018
E14.5 retina
GTGCTCTGGG
(
5
)
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
GAGCAGAGCG
(
2
)
10.9
0.0109
E16.5 retina
GTGCTCTGGG
(
5
)
3.6
0.0036
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
CTAGGCAAAC (
7
)
1.8
0.0018
E18.5 retina
GAGCAGAGCG
(
2
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
GAGCAGAGCG
(
2
)
3.9
0.0039
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
CTAGGCAAAC (
7
)
3.5
0.0035
P2.5 retina
GAGCAGAGCG
(
2
)
3.5
0.0035
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
GAGCAGAGCG
(
2
)
2
0.002
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
GAGCAGAGCG
(
2
)
3.3
0.0033
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
GAGCAGAGCG
(
2
)
14.9
0.0149
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
GAGCAGAGCG
(
2
)
3.8
0.0038
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
GAGCAGAGCG
(
2
)
3.7
0.0037
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
GAGCAGAGCG
(
2
)
3.8
0.0038
