Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.239354	Clk4	CDC like kinase 4	11		12750
Gene Ontology	ATP binding | autophosphorylation | nucleus | peptidyl-tyrosine phosphorylation | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	CLK4[CDC-like kinase 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGTTGACT 9.8 0.0098 P8 Cb GC TACAAAAAAA (9) 6.5 0.0065 P8 Cb GC GGATGTCCTT (3) 3.3 0.0033 Cb medulloblastoma TACAAAAAAA (9) 9.2 0.0092 Cb medulloblastoma AAGGTTGACT 6.9 0.0069 Cb medulloblastoma AGTTTGGTGG 4.6 0.0046 P8 GC+1d culture AAGGTTGACT 3.4 0.0034 P8 GC+1d culture TACAAAAAAA (9) 2.3 0.0023 P8 GC+1d culture AGTTTGGTGG 1.1 0.0011 P8 GC+1d culture GGATGTCCTT (3) 1.1 0.0011 P8 GC+SHH+1d culture AAGGTTGACT 4.7 0.0047 P8 GC+SHH+1d culture AGTTTGGTGG 3.5 0.0035 P8 GC+SHH+1d culture TACAAAAAAA (9) 2.3 0.0023 P8 GC+SHH+1d culture GGATGTCCTT (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTTTCTTCT (3) 1.2 0.0012 E15 cortex AAGGTTGACT 9.9 0.0099 Hypothalamus AAGGTTGACT 10.9 0.0109 Hypothalamus AGTTTGGTGG 5.4 0.0054 Hypothalamus GGATGTCCTT (3) 5.4 0.0054 Hypothalamus TTTTTCTTCT (3) 3.6 0.0036 Hypothalamus AGAAGCTGTT (5) 1.8 0.0018 E12.5 retina AAGGTTGACT 11.3 0.0113 E12.5 retina AGTTTGGTGG 3.8 0.0038 E12.5 retina ACAATGCATT (2) 1.9 0.0019 E14.5 retina AAGGTTGACT 9.1 0.0091 E14.5 retina ACAATGCATT (2) 3.6 0.0036 E14.5 retina TACAAAAAAA (9) 3.6 0.0036 E14.5 retina ACACAGCATA 1.8 0.0018 E14.5 retina AGTTTGGTGG 1.8 0.0018 E16.5 retina AAGGTTGACT 19.9 0.0199 E16.5 retina AGAAGCTGTT (5) 3.6 0.0036 E16.5 retina AGTTTGGTGG 3.6 0.0036 E16.5 retina GGATGTCCTT (3) 1.8 0.0018 E16.5 retina TACAAAAGAT (6) 1.8 0.0018 E18.5 retina AAGGTTGACT 32.7 0.0327 E18.5 retina TACAAAAGAT (6) 3.6 0.0036 E18.5 retina AGTTTGGTGG 1.8 0.0018 E18.5 retina GGATGTCCTT (3) 1.8 0.0018 E18.5 retina TACAAAAAAA (9) 1.8 0.0018 P0.5 retina AAGGTTGACT 5.9 0.0059 P0.5 retina GGATGTCCTT (3) 3.9 0.0039 P0.5 retina TACAAAAGAT (6) 2 0.002 P0.5 retina TTTTTCTTCT (3) 2 0.002 P2.5 retina AAGGTTGACT 22.9 0.0229 P2.5 retina TACAAAAAAA (9) 5.3 0.0053 P2.5 retina AGTTTGGTGG 1.8 0.0018 P2.5 retina GGATGTCCTT (3) 1.8 0.0018 P2.5 retina TTTTTCTTCT (3) 1.8 0.0018 P4.5 retina AAGGTTGACT 23.8 0.0238 P4.5 retina TACAAAAAAA (9) 7.9 0.0079 P6.5 retina AAGGTTGACT 15 0.015 P6.5 retina AGTTTGGTGG 3.3 0.0033 P6.5 retina TACAAAAGAT (6) 1.7 0.0017 P10.5 crx- retina AAGGTTGACT 16.7 0.0167 P10.5 crx- retina GGATGTCCTT (3) 3.7 0.0037 P10.5 crx- retina ACACAGCATA 1.9 0.0019 P10.5 crx- retina AGTTTGGTGG 1.9 0.0019 P10.5 crx- retina TACAAAAAAA (9) 1.9 0.0019 P10.5 crx+ retina AAGGTTGACT 17.3 0.0173 P10.5 crx+ retina AGAAGCTGTT (5) 3.8 0.0038 P10.5 crx+ retina TACAAAAAAA (9) 1.9 0.0019 Adult retinal AAGGTTGACT 13 0.013 Adult retinal TACAAAAAAA (9) 1.9 0.0019 ONL AAGGTTGACT 3.8 0.0038 ONL GGATGTCCTT (3) 3.8 0.0038 ONL TACAAAAAAA (9) 3.8 0.0038 ONL TTTTTCTTCT (3) 3.8 0.0038 ONL ACACAGCATA 1.9 0.0019 ONL AGTTTGGTGG 1.9 0.0019 ONL TACAAAAGAT (6) 1.9 0.0019