Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.239412	2210010N04Rik	RIKEN cDNA 2210010N04 gene	5		70381
Gene Ontology	sugar binding
Human Homolog	DKFZP434B0335[DKFZP434B0335 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACACACACA (106) 11.4 0.0114 P8 Cb GC GGAGGCTTTT (5) 4.9 0.0049 P8 Cb GC AGGACCTGAG (6) 1.6 0.0016 Cb medulloblastoma CACACACACA (106) 32.4 0.0324 Cb medulloblastoma TTCTGAGTCT (2) 2.3 0.0023 P8 GC+1d culture CACACACACA (106) 6.8 0.0068 P8 GC+1d culture GGAGGCTTTT (5) 4.6 0.0046 P8 GC+1d culture GCGTGCCTGG 3.4 0.0034 P8 GC+1d culture TTCTGAGTCT (2) 2.3 0.0023 P8 GC+1d culture AGGACCTGAG (6) 1.1 0.0011 P8 GC+SHH+1d culture CACACACACA (106) 9.4 0.0094 P8 GC+SHH+1d culture GGAGGCTTTT (5) 8.2 0.0082 P8 GC+SHH+1d culture GCGTGCCTGG 1.2 0.0012 P8 GC+SHH+1d culture TTCTGAGTCT (2) 1.2 0.0012 3T3 fibroblasts GGAGGCTTTT (5) 31.5 0.0315 3T3 fibroblasts CACACACACA (106) 17.5 0.0175 E15 cortex GGAGGCTTTT (5) 9.9 0.0099 E15 cortex CACACACACA (106) 4.9 0.0049 P1 cortex CACACACACA (106) 27.3 0.0273 P1 cortex TTCTGAGTCT (2) 4.5 0.0045 Hypothalamus CACACACACA (106) 96 0.096 Hypothalamus GCGTGCCTGG 3.6 0.0036 Hypothalamus GGAGGCTTTT (5) 1.8 0.0018 Hypothalamus TTCTGAGTCT (2) 1.8 0.0018 E12.5 retina CACACACACA (106) 3.8 0.0038 E12.5 retina GGAGGCTTTT (5) 1.9 0.0019 E12.5 retina TGTGCCAAAG (3) 1.9 0.0019 E14.5 retina CACACACACA (106) 18.2 0.0182 E14.5 retina AGGACCTGAG (6) 1.8 0.0018 E14.5 retina GGAGGCTTTT (5) 1.8 0.0018 E16.5 retina CACACACACA (106) 12.7 0.0127 E16.5 retina AGGAGAGAGT (3) 1.8 0.0018 E16.5 retina GGAGGCTTTT (5) 1.8 0.0018 E18.5 retina CACACACACA (106) 5.5 0.0055 E18.5 retina GGAGGCTTTT (5) 5.5 0.0055 E18.5 retina GCGTGCCTGG 1.8 0.0018 P0.5 retina GGAGGCTTTT (5) 21.6 0.0216 P0.5 retina CACACACACA (106) 7.9 0.0079 P0.5 retina AGGAGAGAGT (3) 2 0.002 P0.5 retina GCGTGCCTGG 2 0.002 P0.5 retina TGTGCCAAAG (3) 2 0.002 P2.5 retina CACACACACA (106) 21.1 0.0211 P2.5 retina GCGTGCCTGG 8.8 0.0088 P2.5 retina GGAGGCTTTT (5) 5.3 0.0053 P4.5 retina CACACACACA (106) 7.9 0.0079 P4.5 retina GCGTGCCTGG 4 0.004 P4.5 retina GGAGGCTTTT (5) 2 0.002 P4.5 retina TTCTGAGTCT (2) 2 0.002 P6.5 retina CACACACACA (106) 8.3 0.0083 P6.5 retina GGAGGCTTTT (5) 5 0.005 P6.5 retina GCGTGCCTGG 1.7 0.0017 P6.5 retina TTCTGAGTCT (2) 1.7 0.0017 P10.5 crx- retina CACACACACA (106) 5.6 0.0056 P10.5 crx- retina GGAGGCTTTT (5) 3.7 0.0037 P10.5 crx- retina AGGAGAGAGT (3) 1.9 0.0019 P10.5 crx- retina TGTGCCAAAG (3) 1.9 0.0019 P10.5 crx+ retina CACACACACA (106) 7.7 0.0077 P10.5 crx+ retina GGAGGCTTTT (5) 3.8 0.0038 Adult retinal GGAGGCTTTT (5) 20.4 0.0204 Adult retinal CACACACACA (106) 16.7 0.0167 Adult retinal TTCTGAGTCT (2) 3.7 0.0037 Adult retinal GCGTGCCTGG 1.9 0.0019 ONL CACACACACA (106) 21.1 0.0211 ONL GGAGGCTTTT (5) 7.7 0.0077 ONL AGGACCTGAG (6) 5.7 0.0057