Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.239765	2310042M24Rik	RIKEN cDNA 2310042M24 gene	2		66958
Gene Ontology	DNA binding | integral to membrane | nucleus
Human Homolog	TMX2[thioredoxin-related transmembrane protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 89 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC ATAAAACCCC (4) 3.3 0.0033 P8 Cb GC ATTTTCATCA (2) 3.3 0.0033 P8 Cb GC TCAGAAGAGA (3) 3.3 0.0033 P8 Cb GC CAGGCAGAAT (10) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma ATAAAACCCC (4) 6.9 0.0069 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture TCAGAAGAGA (3) 5.7 0.0057 P8 GC+1d culture CAAACTGTGC (4) 3.4 0.0034 P8 GC+1d culture CAGGCAGAAT (10) 3.4 0.0034 P8 GC+1d culture ATTTTCATCA (2) 2.3 0.0023 P8 GC+1d culture CATACAGTGG (4) 2.3 0.0023 P8 GC+1d culture GGGGACCCAG (5) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture ATAAAACCCC (4) 5.9 0.0059 P8 GC+SHH+1d culture TCAGAAGAGA (3) 5.9 0.0059 P8 GC+SHH+1d culture ATTTTCATCA (2) 3.5 0.0035 P8 GC+SHH+1d culture CAAACTGTGC (4) 1.2 0.0012 P8 GC+SHH+1d culture CAGGCAGAAT (10) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts ATAAAACCCC (4) 3.5 0.0035 3T3 fibroblasts ATTTTCATCA (2) 3.5 0.0035 3T3 fibroblasts CAGGCAGAAT (10) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus ATTTTCATCA (2) 1.8 0.0018 Hypothalamus CAGGCAGAAT (10) 1.8 0.0018 Hypothalamus CATACAGTGG (4) 1.8 0.0018 Hypothalamus GGGGACCCAG (5) 1.8 0.0018 Hypothalamus TCAGAAGAGA (3) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina TCAGAAGAGA (3) 3.8 0.0038 E12.5 retina ATTTTCATCA (2) 1.9 0.0019 E12.5 retina CAAACTGTGC (4) 1.9 0.0019 E12.5 retina CAGGCAGAAT (10) 1.9 0.0019 E12.5 retina TTCCTGATGA (4) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina TTCCTGATGA (4) 3.6 0.0036 E14.5 retina TCAGAAGAGA (3) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina TCAGAAGAGA (3) 5.4 0.0054 E16.5 retina GATACTGTGC (2) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina CAGGCAGAAT (10) 5.5 0.0055 E18.5 retina CAAACTGTGC (4) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina TCAGAAGAGA (3) 9.8 0.0098 P0.5 retina ATTTTCATCA (2) 2 0.002 P0.5 retina CAGGCAGAAT (10) 2 0.002 P0.5 retina CATACAGTGG (4) 2 0.002 P0.5 retina GATACTGTGC (2) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina TCAGAAGAGA (3) 5.3 0.0053 P2.5 retina CAGGCAGAAT (10) 1.8 0.0018 P2.5 retina CAGGCAGGAT (3) 1.8 0.0018 P2.5 retina TTCCTGATGA (4) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina TCAGAAGAGA (3) 5.9 0.0059 P4.5 retina CAAACTGTGC (4) 4 0.004 P4.5 retina CAGGCAGAAT (10) 4 0.004 P4.5 retina GATACTGTGC (2) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina CAAACTGTGC (4) 3.3 0.0033 P6.5 retina TCAGAAGAGA (3) 3.3 0.0033 P6.5 retina CAGGCAGGAT (3) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina ATTTTCATCA (2) 14.9 0.0149 P10.5 crx- retina TCAGAAGAGA (3) 5.6 0.0056 P10.5 crx- retina CAAACTGTGC (4) 3.7 0.0037 P10.5 crx- retina CAGGCAGAAT (10) 1.9 0.0019 P10.5 crx- retina CATACAGTGC 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina ATTTTCATCA (2) 3.8 0.0038 P10.5 crx+ retina CAAACTGTGC (4) 1.9 0.0019 P10.5 crx+ retina CAGGCAGAAT (10) 1.9 0.0019 P10.5 crx+ retina CATACAGTGC 1.9 0.0019 P10.5 crx+ retina GGGGACCCAG (5) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal CAAACTGTGC (4) 3.7 0.0037 Adult retinal TCAGAAGAGA (3) 3.7 0.0037 Adult retinal TTCCTGATGA (4) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL CAGGCAGAAT (10) 13.4 0.0134 ONL CAAACTGTGC (4) 9.6 0.0096 ONL TCAGAAGAGA (3) 5.7 0.0057 ONL ATTTTCATCA (2) 3.8 0.0038 ONL CAGGCAGGAT (3) 1.9 0.0019