Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.23977
5830436D01Rik
RIKEN cDNA 5830436D01 gene
13
76041
Mm.23977
C230069N13
hypothetical protein C230069N13
13
328322
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTGTAATCC (
34
)
6.5
0.0065
P8 Cb GC
TCCTCCAAGA
(
4
)
1.6
0.0016
Cb medulloblastoma
CCTGTAATCC (
34
)
11.6
0.0116
P8 GC+1d culture
TCCTCCAAGA
(
4
)
4.6
0.0046
P8 GC+1d culture
CCTGTAATCC (
34
)
1.1
0.0011
P8 GC+1d culture
GCTGGAATAC (
6
)
1.1
0.0011
P8 GC+1d culture
TGTTTGGATG (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTGTAATCC (
34
)
4.7
0.0047
P8 GC+SHH+1d culture
TCCTCCAAGA
(
4
)
3.5
0.0035
3T3 fibroblasts
CCTGTAATCC (
34
)
10.5
0.0105
E15 cortex
CCTGTAATCC (
34
)
4.9
0.0049
P1 cortex
CCTGTAATCC (
34
)
13.6
0.0136
Hypothalamus
CCTGTAATCC (
34
)
5.4
0.0054
E12.5 retina
CCTGTAATCC (
34
)
3.8
0.0038
E12.5 retina
TCCTCCAAGA
(
4
)
1.9
0.0019
E14.5 retina
CCTGTAATCC (
34
)
5.5
0.0055
E16.5 retina
CCTGTAATCC (
34
)
3.6
0.0036
E16.5 retina
TGTTTGGATG (
3
)
1.8
0.0018
E18.5 retina
CCTGTAATCC (
34
)
1.8
0.0018
P0.5 retina
CCTGTAATCC (
34
)
3.9
0.0039
P2.5 retina
CCTGTAATCC (
34
)
3.5
0.0035
P2.5 retina
TCCTCCAAGA
(
4
)
1.8
0.0018
P4.5 retina
CCTGTAATCC (
34
)
5.9
0.0059
P6.5 retina
CCTGTAATCC (
34
)
1.7
0.0017
P6.5 retina
TCCTCCAAGA
(
4
)
1.7
0.0017
P10.5 crx- retina
CCTGTAATCC (
34
)
3.7
0.0037
P10.5 crx- retina
TGTTTGGATG (
3
)
1.9
0.0019
P10.5 crx+ retina
CCTGTAATCC (
34
)
3.8
0.0038
P10.5 crx+ retina
TGTTTGGATG (
3
)
1.9
0.0019
Adult retinal
CCTGTAATCC (
34
)
3.7
0.0037
Adult retinal
GCTGGAATAC (
6
)
1.9
0.0019
ONL
CCTGTAATCC (
34
)
3.8
0.0038
ONL
GCTGGAATAC (
6
)
1.9
0.0019
ONL
TGTTTGGATG (
3
)
1.9
0.0019
