Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24001	Mef2c	myocyte enhancer factor 2C	13	13 45.0 cM	17260
Gene Ontology	DNA binding | muscle development | neurogenesis | nucleus | protein binding | regulation of transcription, DNA-dependent | RNA polymerase II transcription factor activity | transcription coactivator activity | transcription factor activity | transcription factor activity | transcription from Pol II promoter
Human Homolog	MEF2C[MADS box transcription enhancer factor 2, polypeptide C (myocyte enhancer factor 2C)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCTTGGAT (2) 1.6 0.0016 P8 Cb GC ATCACATTAT 1.6 0.0016 P8 Cb GC TAAATTATTC (2) 1.6 0.0016 Cb medulloblastoma GAATGGAAAC (5) 6.9 0.0069 Cb medulloblastoma TAAATAGACA (4) 4.6 0.0046 P8 GC+1d culture CTAATATATT (2) 1.1 0.0011 P8 GC+1d culture TGCATATGCA 1.1 0.0011 P8 GC+SHH+1d culture CTAATATATT (2) 1.2 0.0012 P8 GC+SHH+1d culture GAATGGAAAC (5) 1.2 0.0012 P8 GC+SHH+1d culture TGCATATGCA 1.2 0.0012 E15 cortex AAGCTTGGAT (2) 9.9 0.0099 P1 cortex TATGTCACCT 22.7 0.0227 P1 cortex ATCACATTAT 9.1 0.0091 P1 cortex AAGCTTGGAT (2) 4.5 0.0045 P1 cortex GAATGGAAAC (5) 4.5 0.0045 P1 cortex TAAATAGACA (4) 4.5 0.0045 Hypothalamus TAAATTATTC (2) 3.6 0.0036 Hypothalamus AAGCTTGGAT (2) 1.8 0.0018 Hypothalamus GAATGGAAAC (5) 1.8 0.0018 Hypothalamus TATGTCACCT 1.8 0.0018 E12.5 retina TAAATTATTC (2) 3.8 0.0038 E12.5 retina GAATGGAAAC (5) 1.9 0.0019 E16.5 retina CTAATATATT (2) 1.8 0.0018 E18.5 retina TAAATTATTC (2) 1.8 0.0018 P0.5 retina TAAATAGACA (4) 2 0.002 P0.5 retina TATGTCACCT 2 0.002 P2.5 retina TGCATATGCA 1.8 0.0018 P4.5 retina TGCATATGCA 2 0.002 P6.5 retina CTAATATATT (2) 1.7 0.0017 P6.5 retina GAATGGAAAC (5) 1.7 0.0017 P6.5 retina TAAATTATTC (2) 1.7 0.0017 P6.5 retina TGCATATGCA 1.7 0.0017 P10.5 crx- retina AAGCTTGGAT (2) 1.9 0.0019 P10.5 crx- retina CTAATATATT (2) 1.9 0.0019 P10.5 crx+ retina TGCATATGCA 3.8 0.0038 P10.5 crx+ retina GAATGGAAAC (5) 1.9 0.0019 Adult retinal AAGCTTGGAT (2) 1.9 0.0019 Adult retinal TATGTCACCT 1.9 0.0019 Adult retinal TGCATATGCA 1.9 0.0019 ONL AAGCTTGGAT (2) 1.9 0.0019 ONL TATGTCACCT 1.9 0.0019