Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.240224	Rab2	RAB2, member RAS oncogene family	4		59021
Mm.240224	D130047N11Rik	RIKEN cDNA D130047N11 gene	4		320996
Mm.240224	C530036F05Rik	RIKEN cDNA C530036F05 gene	4		319355
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 125 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAGCCAACC (5) 4.9 0.0049 P8 Cb GC GTGGCACACG (29) 4.9 0.0049 P8 Cb GC TATGATGGAC (6) 4.9 0.0049 P8 Cb GC ACCAAGGCAA (29) 1.6 0.0016 P8 Cb GC AGAAATTTTA (4) 1.6 0.0016 P8 Cb GC ATTTTAATAT (7) 1.6 0.0016 P8 Cb GC CCACTTACTC (3) 1.6 0.0016 P8 Cb GC CTTGGAAAAA (9) 1.6 0.0016 P8 Cb GC GAAACTTCTG (4) 1.6 0.0016 P8 Cb GC GGAACCAGAA (7) 1.6 0.0016 Cb medulloblastoma CCACTTACTC (3) 6.9 0.0069 Cb medulloblastoma AAACTATTGA (5) 2.3 0.0023 Cb medulloblastoma ACCAAGGCAA (29) 2.3 0.0023 Cb medulloblastoma AGAAATTTTA (4) 2.3 0.0023 Cb medulloblastoma CAGGTGCTGG (7) 2.3 0.0023 Cb medulloblastoma GGAACCAGAA (7) 2.3 0.0023 Cb medulloblastoma GTGGCACACG (29) 2.3 0.0023 P8 GC+1d culture TATGATGGAC (6) 8 0.008 P8 GC+1d culture CCACTTACTC (3) 5.7 0.0057 P8 GC+1d culture AAACTATTGA (5) 3.4 0.0034 P8 GC+1d culture ACCAAGGCAA (29) 3.4 0.0034 P8 GC+1d culture CTTGGAAAAA (9) 2.3 0.0023 P8 GC+1d culture AGAAATTTTA (4) 1.1 0.0011 P8 GC+1d culture GAAGCCAACC (5) 1.1 0.0011 P8 GC+1d culture GCGTGCCTTC (4) 1.1 0.0011 P8 GC+1d culture GTGGCACACG (29) 1.1 0.0011 P8 GC+SHH+1d culture GTGGCACACG (29) 7 0.007 P8 GC+SHH+1d culture CCACTTACTC (3) 4.7 0.0047 P8 GC+SHH+1d culture AAACTATTGA (5) 2.3 0.0023 P8 GC+SHH+1d culture CTTGGAAAAA (9) 1.2 0.0012 P8 GC+SHH+1d culture GAAGCCAACC (5) 1.2 0.0012 P8 GC+SHH+1d culture GCGTGCCTTC (4) 1.2 0.0012 P8 GC+SHH+1d culture GTCATCTTTT (6) 1.2 0.0012 3T3 fibroblasts GTGGCACACG (29) 35 0.035 3T3 fibroblasts CTCAGCTGAG (3) 3.5 0.0035 3T3 fibroblasts GAAACTTCTG (4) 3.5 0.0035 E15 cortex GTGGCACACG (29) 69.3 0.0693 E15 cortex TATGATGGAC (6) 19.8 0.0198 E15 cortex ACCAAGGCAA (29) 4.9 0.0049 E15 cortex GAAACTTCTG (4) 4.9 0.0049 P1 cortex TATGATGGAC (6) 95.5 0.0955 P1 cortex GTGGCACACG (29) 9.1 0.0091 P1 cortex AGAAATTTTA (4) 4.5 0.0045 P1 cortex CCACTTACTC (3) 4.5 0.0045 Hypothalamus GAAGCCAACC (5) 7.2 0.0072 Hypothalamus CCACTTACTC (3) 5.4 0.0054 Hypothalamus AGAAATTTTA (4) 1.8 0.0018 Hypothalamus CTTTATTGGA (3) 1.8 0.0018 E12.5 retina GTGGCACACG (29) 13.1 0.0131 E12.5 retina ATTTTAATAT (7) 3.8 0.0038 E12.5 retina CCACTTACTC (3) 3.8 0.0038 E12.5 retina GTCATCTTTT (6) 1.9 0.0019 E14.5 retina GTGGCACACG (29) 18.2 0.0182 E14.5 retina ACCAAGGCAA (29) 14.6 0.0146 E14.5 retina ATTTTAATAT (7) 5.5 0.0055 E14.5 retina GAAGCAACCA (5) 3.6 0.0036 E14.5 retina GCGTGCCTTC (4) 3.6 0.0036 E14.5 retina AAACTATTGA (5) 1.8 0.0018 E14.5 retina CAGGTGCTGG (7) 1.8 0.0018 E14.5 retina CCACTTACTC (3) 1.8 0.0018 E16.5 retina GTGGCACACG (29) 5.4 0.0054 E16.5 retina AAACTATTGA (5) 3.6 0.0036 E16.5 retina CCACTTACTC (3) 3.6 0.0036 E16.5 retina GTCATCTTTT (6) 3.6 0.0036 E16.5 retina TATGATGGAC (6) 3.6 0.0036 E16.5 retina CAGGTGCTGG (7) 1.8 0.0018 E16.5 retina GAAACTTCTG (4) 1.8 0.0018 E16.5 retina GCGTGCCTTC (4) 1.8 0.0018 E18.5 retina ATTTTAATAT (7) 7.3 0.0073 E18.5 retina GTGGCACACG (29) 3.6 0.0036 E18.5 retina AAACTATTGA (5) 1.8 0.0018 E18.5 retina ACCAAGGCAA (29) 1.8 0.0018 E18.5 retina CTTGGAAAAA (9) 1.8 0.0018 E18.5 retina TATGATGGAC (6) 1.8 0.0018 P0.5 retina CCACTTACTC (3) 17.7 0.0177 P0.5 retina GTGGCACACG (29) 5.9 0.0059 P0.5 retina AAACTATTGA (5) 3.9 0.0039 P0.5 retina ACCAAGGCAA (29) 3.9 0.0039 P0.5 retina GAAACTTCTG (4) 2 0.002 P0.5 retina TATGATGGAC (6) 2 0.002 P2.5 retina GTGGCACACG (29) 8.8 0.0088 P2.5 retina AAACTATTGA (5) 5.3 0.0053 P2.5 retina CCACTTACTC (3) 5.3 0.0053 P2.5 retina ATTTTAATAT (7) 3.5 0.0035 P2.5 retina GAAACTTCTG (4) 3.5 0.0035 P2.5 retina TATGATGGAC (6) 3.5 0.0035 P2.5 retina ACCAAGGCAA (29) 1.8 0.0018 P2.5 retina GAAGCAACCA (5) 1.8 0.0018 P2.5 retina GTCATCTTTT (6) 1.8 0.0018 P4.5 retina GTGGCACACG (29) 13.9 0.0139 P4.5 retina AAACTATTGA (5) 4 0.004 P4.5 retina CCACTTACTC (3) 4 0.004 P4.5 retina GTCATCTTTT (6) 4 0.004 P4.5 retina TATGATGGAC (6) 4 0.004 P6.5 retina CCACTTACTC (3) 6.7 0.0067 P6.5 retina GTGGCACACG (29) 6.7 0.0067 P6.5 retina TATGATGGAC (6) 5 0.005 P6.5 retina GTCATCTTTT (6) 3.3 0.0033 P6.5 retina AAACTATTGA (5) 1.7 0.0017 P6.5 retina ACCAAGGCAA (29) 1.7 0.0017 P10.5 crx- retina AAACTATTGA (5) 7.4 0.0074 P10.5 crx- retina GTCATCTTTT (6) 5.6 0.0056 P10.5 crx- retina GCGTGCCTTC (4) 1.9 0.0019 P10.5 crx- retina GGAACCAGAA (7) 1.9 0.0019 P10.5 crx- retina GTGGCACACG (29) 1.9 0.0019 P10.5 crx+ retina GTGGCACACG (29) 9.6 0.0096 P10.5 crx+ retina GTCATCTTTT (6) 3.8 0.0038 P10.5 crx+ retina ACCAAGGCAA (29) 1.9 0.0019 P10.5 crx+ retina CCACTTACTC (3) 1.9 0.0019 P10.5 crx+ retina CTTTATTGGA (3) 1.9 0.0019 P10.5 crx+ retina GAAACTTCTG (4) 1.9 0.0019 P10.5 crx+ retina GCGTGCCTTC (4) 1.9 0.0019 P10.5 crx+ retina TATGATGGAC (6) 1.9 0.0019 Adult retinal GTGGCACACG (29) 13 0.013 Adult retinal GTCATCTTTT (6) 7.4 0.0074 Adult retinal CCACTTACTC (3) 3.7 0.0037 Adult retinal TATGATGGAC (6) 3.7 0.0037 Adult retinal ACCAAGGCAA (29) 1.9 0.0019 Adult retinal GAAGCCAACC (5) 1.9 0.0019 Adult retinal GCGTGCCTTC (4) 1.9 0.0019 ONL ACCAAGGCAA (29) 9.6 0.0096 ONL GTGGCACACG (29) 7.7 0.0077 ONL CCACTTACTC (3) 3.8 0.0038 ONL CTCAGCTGAG (3) 3.8 0.0038 ONL CTTTATTGGA (3) 1.9 0.0019