Mouse Retina SAGE Library
[
Home
] [
Libraries
] [
Images
]
Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.240437
Igh-VJ558
immunoglobulin heavy chain (J558 family)
12
12 59.0 cM
16061
Human Homolog
MGC27165[hypothetical protein MGC27165]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 64 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCAAAAAAAA (
50
)
14.7
0.0147
P8 Cb GC
GGGAGCGAAA (
4
)
13.1
0.0131
P8 Cb GC
TACTCTGAAA
(
4
)
1.6
0.0016
Cb medulloblastoma
GCAAAAAAAA (
50
)
60.1
0.0601
Cb medulloblastoma
GGGAGCGAAA (
4
)
39.3
0.0393
Cb medulloblastoma
TATCCTGAAT (
3
)
4.6
0.0046
P8 GC+1d culture
GGGAGCGAAA (
4
)
21.7
0.0217
P8 GC+1d culture
GCAAAAAAAA (
50
)
12.6
0.0126
P8 GC+1d culture
TATCCTGAAT (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GCAAAAAAAA (
50
)
29.3
0.0293
P8 GC+SHH+1d culture
GGGAGCGAAA (
4
)
23.4
0.0234
P8 GC+SHH+1d culture
TACTCTGAAA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TATCCTGAAT (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGACAGAGG (
3
)
1.2
0.0012
3T3 fibroblasts
GGGAGCGAAA (
4
)
7
0.007
3T3 fibroblasts
ACAACACAGG (
6
)
3.5
0.0035
3T3 fibroblasts
GCAAAAAAAA (
50
)
3.5
0.0035
E15 cortex
GGGAGCGAAA (
4
)
54.4
0.0544
E15 cortex
GCAAAAAAAA (
50
)
9.9
0.0099
P1 cortex
GGGAGCGAAA (
4
)
9.1
0.0091
P1 cortex
GCAAAAAAAA (
50
)
4.5
0.0045
Hypothalamus
GCAAAAAAAA (
50
)
19.9
0.0199
Hypothalamus
GGGAGCGAAA (
4
)
12.7
0.0127
Hypothalamus
TATCCTGAAT (
3
)
7.2
0.0072
Hypothalamus
ACAACACAGG (
6
)
1.8
0.0018
Hypothalamus
GGAGTGTCCA (
3
)
1.8
0.0018
E12.5 retina
GGGAGCGAAA (
4
)
18.8
0.0188
E12.5 retina
GCAAAAAAAA (
50
)
9.4
0.0094
E12.5 retina
GGAGTGTCCA (
3
)
1.9
0.0019
E14.5 retina
GGGAGCGAAA (
4
)
31
0.031
E14.5 retina
GCAAAAAAAA (
50
)
12.8
0.0128
E14.5 retina
GGAGTGTCCA (
3
)
1.8
0.0018
E16.5 retina
GGGAGCGAAA (
4
)
29
0.029
E16.5 retina
GCAAAAAAAA (
50
)
10.9
0.0109
E18.5 retina
GCAAAAAAAA (
50
)
25.5
0.0255
E18.5 retina
GGGAGCGAAA (
4
)
18.2
0.0182
P0.5 retina
GGGAGCGAAA (
4
)
25.5
0.0255
P0.5 retina
GCAAAAAAAA (
50
)
17.7
0.0177
P0.5 retina
ACAACACAGG (
6
)
3.9
0.0039
P0.5 retina
GGAGTGTCCA (
3
)
2
0.002
P2.5 retina
GCAAAAAAAA (
50
)
22.9
0.0229
P2.5 retina
GGGAGCGAAA (
4
)
14.1
0.0141
P2.5 retina
GGAGTGTCCA (
3
)
3.5
0.0035
P2.5 retina
ACAACACAGG (
6
)
1.8
0.0018
P2.5 retina
TGGACAGAGG (
3
)
1.8
0.0018
P4.5 retina
GCAAAAAAAA (
50
)
25.8
0.0258
P4.5 retina
GGGAGCGAAA (
4
)
11.9
0.0119
P4.5 retina
GGAGTGTCCA (
3
)
9.9
0.0099
P4.5 retina
TGGACAGAGG (
3
)
2
0.002
P6.5 retina
GCAAAAAAAA (
50
)
11.7
0.0117
P6.5 retina
GGGAGCGAAA (
4
)
3.3
0.0033
P10.5 crx- retina
GGGAGCGAAA (
4
)
14.9
0.0149
P10.5 crx- retina
GCAAAAAAAA (
50
)
5.6
0.0056
P10.5 crx+ retina
GCAAAAAAAA (
50
)
1.9
0.0019
P10.5 crx+ retina
GGGAGCGAAA (
4
)
1.9
0.0019
P10.5 crx+ retina
TATCCTGAAT (
3
)
1.9
0.0019
Adult retinal
GCAAAAAAAA (
50
)
11.1
0.0111
Adult retinal
TATCCTGAAT (
3
)
3.7
0.0037
Adult retinal
GGGAGCGAAA (
4
)
1.9
0.0019
Adult retinal
TGGACAGAGG (
3
)
1.9
0.0019
ONL
GCAAAAAAAA (
50
)
1.9
0.0019
ONL
GGATACATAA (
4
)
1.9
0.0019
ONL
GGGAGCGAAA (
4
)
1.9
0.0019
ONL
TGGACAGAGG (
3
)
1.9
0.0019
