Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2409	Adh1	alcohol dehydrogenase 1 (class I)	3	3 71.2 cM	11522
Gene Ontology	alcohol dehydrogenase activity | alcohol dehydrogenase activity | alcohol dehydrogenase activity, zinc-dependent | oxidoreductase activity | retinoid metabolism | zinc ion binding
Human Homolog	ADH1C[alcohol dehydrogenase 1C (class I), gamma polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 101 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAATGTGG (7) 11.4 0.0114 P8 Cb GC ATGTCAGAAA (4) 9.8 0.0098 P8 Cb GC GTGCCGTGTT (2) 1.6 0.0016 P8 Cb GC TTGGCTGCTG (4) 1.6 0.0016 P8 Cb GC TTTTTACCTT (5) 1.6 0.0016 Cb medulloblastoma AAAAATGTGG (7) 9.2 0.0092 Cb medulloblastoma ATGTCAGAAA (4) 6.9 0.0069 Cb medulloblastoma TCAAAGAATT (3) 4.6 0.0046 Cb medulloblastoma TTGGCTGCTG (4) 2.3 0.0023 P8 GC+1d culture ATGTCAGAAA (4) 30.8 0.0308 P8 GC+1d culture AAAAATGTGG (7) 10.3 0.0103 P8 GC+1d culture TTTTTACCTT (5) 6.8 0.0068 P8 GC+1d culture CGCAAACCAA 2.3 0.0023 P8 GC+1d culture GTGCCGTGTT (2) 1.1 0.0011 P8 GC+1d culture TTGGCTGCTG (4) 1.1 0.0011 P8 GC+1d culture TTTTTACCCT (2) 1.1 0.0011 P8 GC+SHH+1d culture ATGTCAGAAA (4) 10.5 0.0105 P8 GC+SHH+1d culture TTTTTACCTT (5) 5.9 0.0059 P8 GC+SHH+1d culture AAAAATGTGG (7) 3.5 0.0035 P8 GC+SHH+1d culture TGCTGTGGAC (4) 2.3 0.0023 P8 GC+SHH+1d culture AAACCCCCCA (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGCCGTGTT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTTTTACCCT (2) 1.2 0.0012 3T3 fibroblasts GTGCCGTGTT (2) 14 0.014 3T3 fibroblasts TTGGCTGCTG (4) 3.5 0.0035 E15 cortex AAAAATGTGG (7) 14.8 0.0148 E15 cortex TCAAAGAATT (3) 4.9 0.0049 P1 cortex TTGCTGCTGC (5) 18.2 0.0182 P1 cortex TCAAAGAATT (3) 9.1 0.0091 P1 cortex AAAAATGTGG (7) 4.5 0.0045 P1 cortex TTTTTACCTT (5) 4.5 0.0045 Hypothalamus TTGGCTGCTG (4) 3.6 0.0036 Hypothalamus TTTTTACCTT (5) 3.6 0.0036 Hypothalamus AAAAATGTGG (7) 1.8 0.0018 Hypothalamus TGGCCGTGGT (3) 1.8 0.0018 Hypothalamus TTGCTGCTGC (5) 1.8 0.0018 E12.5 retina AAAAATGTGG (7) 7.5 0.0075 E12.5 retina CGCAAACCAA 3.8 0.0038 E12.5 retina TCAAAGAATT (3) 1.9 0.0019 E14.5 retina AAAAATGTGG (7) 3.6 0.0036 E14.5 retina ATGTCAGAAA (4) 1.8 0.0018 E14.5 retina TGGATGCCTT 1.8 0.0018 E14.5 retina TTTTCCCTTT (7) 1.8 0.0018 E16.5 retina TTTTTACCTT (5) 7.2 0.0072 E16.5 retina ATTTGCAAAG 5.4 0.0054 E16.5 retina AAAAATGTGG (7) 3.6 0.0036 E16.5 retina TGGCCGTGGT (3) 3.6 0.0036 E16.5 retina ATGTCAGAAA (4) 1.8 0.0018 E16.5 retina CGCAAACCAA 1.8 0.0018 E16.5 retina TGTGTGTGGA (5) 1.8 0.0018 E16.5 retina TTGGCTGCTG (4) 1.8 0.0018 E18.5 retina AAAAATGTGG (7) 9.1 0.0091 E18.5 retina ATTTGCAAAG 1.8 0.0018 E18.5 retina CGCAAACCAA 1.8 0.0018 E18.5 retina GTGCCGTGTT (2) 1.8 0.0018 E18.5 retina TCAAAGAATT (3) 1.8 0.0018 P0.5 retina AAAAATGTGG (7) 7.9 0.0079 P0.5 retina ATGTCAGAAA (4) 2 0.002 P0.5 retina GTGCCGTGTT (2) 2 0.002 P0.5 retina TCAAAGAATT (3) 2 0.002 P0.5 retina TGTGTGTGGA (5) 2 0.002 P0.5 retina TTGCTGCTGC (5) 2 0.002 P0.5 retina TTTTTACCTT (5) 2 0.002 P2.5 retina TTTTTACCTT (5) 8.8 0.0088 P2.5 retina AAAAATGTGG (7) 7 0.007 P2.5 retina TGCTGTGGAC (4) 3.5 0.0035 P2.5 retina AAACCCCCCA (2) 1.8 0.0018 P2.5 retina CGCAAACCAA 1.8 0.0018 P2.5 retina TGGATGCCTT 1.8 0.0018 P4.5 retina AAAAATGTGG (7) 17.8 0.0178 P4.5 retina TGTGTGTGGA (5) 2 0.002 P4.5 retina TTTTTACCTT (5) 2 0.002 P6.5 retina AAAAATGTGG (7) 8.3 0.0083 P6.5 retina TGTGTGTGGA (5) 5 0.005 P6.5 retina TTTTTACCTT (5) 5 0.005 P6.5 retina ATCTCAAAAA (3) 3.3 0.0033 P6.5 retina ATTTGCAAAG 3.3 0.0033 P6.5 retina ATGTCAGAAA (4) 1.7 0.0017 P6.5 retina TTTTCCCTTT (7) 1.7 0.0017 P10.5 crx- retina TTTTTACCTT (5) 18.6 0.0186 P10.5 crx- retina AAAAATGTGG (7) 14.9 0.0149 P10.5 crx- retina TTGCTGCTGC (5) 5.6 0.0056 P10.5 crx- retina AAACCCCCCA (2) 3.7 0.0037 P10.5 crx- retina ATGTCAGAAA (4) 3.7 0.0037 P10.5 crx- retina GTGCCGTGTT (2) 1.9 0.0019 P10.5 crx- retina TTTTTACCCT (2) 1.9 0.0019 P10.5 crx+ retina AAAAATGTGG (7) 15.4 0.0154 P10.5 crx+ retina CGCAAACCAA 1.9 0.0019 P10.5 crx+ retina GTGCCGTGTT (2) 1.9 0.0019 P10.5 crx+ retina TGGATGCCTT 1.9 0.0019 P10.5 crx+ retina TTGCTGCTGC (5) 1.9 0.0019 P10.5 crx+ retina TTTTTACCTT (5) 1.9 0.0019 Adult retinal AAAAATGTGG (7) 5.6 0.0056 Adult retinal TTGCTGCTGC (5) 5.6 0.0056 Adult retinal AAACCCCCCA (2) 1.9 0.0019 Adult retinal AGACCCCAGC (2) 1.9 0.0019 Adult retinal TTTTTACCTT (5) 1.9 0.0019 ONL AAAAATGTGG (7) 11.5 0.0115 ONL AGACCCCAGC (2) 3.8 0.0038 ONL TGTGTGTGGA (5) 1.9 0.0019 ONL TTTTCCCTTT (7) 1.9 0.0019