Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24125	Col4a3bp	procollagen, type IV, alpha 3 (Goodpasture antigen) binding protein	13		68018
Gene Ontology	kinase activity | protein serine/threonine kinase activity | transferase activity
Human Homolog	COL4A3BP[collagen, type IV, alpha 3 (Goodpasture antigen) binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC TTACAATCAC (3) 4.9 0.0049 P8 Cb GC TTGGAGAAAG (5) 3.3 0.0033 P8 Cb GC GAATATGCCT 1.6 0.0016 P8 Cb GC TTTTTGATGA (4) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma TTGGAGAAAG (5) 18.5 0.0185 Cb medulloblastoma TTACAATCAC (3) 6.9 0.0069 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture TTTTTGATGA (4) 12.6 0.0126 P8 GC+1d culture TTACAATCAC (3) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture TTTTTGATGA (4) 10.5 0.0105 P8 GC+SHH+1d culture TTACAATCAC (3) 3.5 0.0035 P8 GC+SHH+1d culture TTGGAGAAAG (5) 1.2 0.0012 3T3 fibroblasts TTTTTGATGA (4) 14 0.014 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex TTTTTGATGA (4) 9.9 0.0099 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex TTTTTGATGA (4) 40.9 0.0409 P1 cortex GAATATGCCT 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus TTGGAGAAAG (5) 9.1 0.0091 Hypothalamus TTACAATCAC (3) 3.6 0.0036 Hypothalamus GAATATGCCT 1.8 0.0018 Hypothalamus TTTTTGATGA (4) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina TTTTTGATGA (4) 41.3 0.0413 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina TTTTTGATGA (4) 9.1 0.0091 E14.5 retina TTGGAGAAAG (5) 3.6 0.0036 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina TTTTTGATGA (4) 5.4 0.0054 E16.5 retina TTGGAGAAAG (5) 3.6 0.0036 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina TTTTTGATGA (4) 10.9 0.0109 E18.5 retina TTACAATCAC (3) 5.5 0.0055 E18.5 retina TTGGAGAAAG (5) 1.8 0.0018 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina TTTTTGATGA (4) 13.7 0.0137 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina TTTTTGATGA (4) 12.3 0.0123 P2.5 retina TTACAATCAC (3) 5.3 0.0053 P2.5 retina TTGGAGAAAG (5) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina TTACAATCAC (3) 5.9 0.0059 P4.5 retina TTTTTGATGA (4) 5.9 0.0059 P4.5 retina TTGGAGAAAG (5) 4 0.004 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina TTTTTGATGA (4) 6.7 0.0067 P6.5 retina TTACAATCAC (3) 3.3 0.0033 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina TTGGAGAAAG (5) 3.7 0.0037 P10.5 crx- retina TTACAATCAC (3) 1.9 0.0019 P10.5 crx- retina TTTTTGATGA (4) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina TTTTTGATGA (4) 3.8 0.0038 P10.5 crx+ retina TTACAATCAC (3) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal TTACAATCAC (3) 9.3 0.0093 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL TTACAATCAC (3) 5.7 0.0057 ONL TTGGAGAAAG (5) 3.8 0.0038 ONL TTTTTGATGA (4) 3.8 0.0038