Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.241546
5830446M03Rik
RIKEN cDNA 5830446M03 gene
6
57905
Mm.241546
B130021K23Rik
RIKEN cDNA B130021K23 gene
6
319672
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 39 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATCCCCCTCT
(
2
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAT (
25
)
4.6
0.0046
P8 GC+1d culture
AAAAAAAAAT (
25
)
3.4
0.0034
P8 GC+1d culture
ATCCCCCTCT
(
2
)
2.3
0.0023
P8 GC+1d culture
GGTCTGCTTC (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAT (
25
)
5.9
0.0059
P8 GC+SHH+1d culture
ATCCCCCTCT
(
2
)
4.7
0.0047
P8 GC+SHH+1d culture
GCACGCCATC
(
4
)
1.2
0.0012
P1 cortex
AAAAAAAAAT (
25
)
9.1
0.0091
Hypothalamus
GGGAGGGATG
(
3
)
1.8
0.0018
E12.5 retina
GGGAGGGATG
(
3
)
1.9
0.0019
E14.5 retina
AAAAAAAAAT (
25
)
5.5
0.0055
E14.5 retina
ATCCCCCTCT
(
2
)
5.5
0.0055
E16.5 retina
ATCCCCCTCT
(
2
)
7.2
0.0072
E16.5 retina
AAAAAAAAAT (
25
)
1.8
0.0018
E16.5 retina
GCACGCCATC
(
4
)
1.8
0.0018
E16.5 retina
GGGAGGGATG
(
3
)
1.8
0.0018
E18.5 retina
AAAAAAAAAT (
25
)
7.3
0.0073
E18.5 retina
ATCCCCCTCT
(
2
)
3.6
0.0036
P0.5 retina
CATCTAGAGG (
11
)
25.5
0.0255
P0.5 retina
AAAAAAAAAT (
25
)
3.9
0.0039
P0.5 retina
ATCCCCCTCT
(
2
)
2
0.002
P2.5 retina
AAAAAAAAAT (
25
)
3.5
0.0035
P2.5 retina
ATCCCCCTCT
(
2
)
1.8
0.0018
P2.5 retina
CATCTAGAGG (
11
)
1.8
0.0018
P4.5 retina
AAAAAAAAAT (
25
)
4
0.004
P4.5 retina
ATCCCCCTCT
(
2
)
2
0.002
P4.5 retina
CATCTAGAGG (
11
)
2
0.002
P4.5 retina
GCACGCCATC
(
4
)
2
0.002
P10.5 crx- retina
AAAAAAAAAT (
25
)
3.7
0.0037
P10.5 crx- retina
GGTCTGCTTC (
3
)
1.9
0.0019
P10.5 crx+ retina
ATCCCCCTCT
(
2
)
3.8
0.0038
P10.5 crx+ retina
CATCTAGAGG (
11
)
1.9
0.0019
P10.5 crx+ retina
GGTCTGCTTC (
3
)
1.9
0.0019
Adult retinal
CATCTAGAGG (
11
)
7.4
0.0074
Adult retinal
AAAAAAAAAT (
25
)
1.9
0.0019
Adult retinal
ATCCCCCTCT
(
2
)
1.9
0.0019
ONL
AAAAAAAAAT (
25
)
1.9
0.0019
ONL
GGGAGGGATG
(
3
)
1.9
0.0019
