Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.241601	Arid4a	AT rich interactive domain 4A (Rbp1 like)	12		238247
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	ARID4A[AT rich interactive domain 4A (RBP1-like)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GACTATATAT (3) 9.8 0.0098 P8 Cb GC TTTTAAAAAA (26) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma TTTTAAAAAA (26) 9.2 0.0092 Cb medulloblastoma GACTATATAT (3) 4.6 0.0046 Cb medulloblastoma AAGAGGAGAA (10) 2.3 0.0023 Cb medulloblastoma ATGATAAACT (6) 2.3 0.0023 Cb medulloblastoma TACTTCAAAA (3) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture GACTATATAT (3) 14.8 0.0148 P8 GC+1d culture GGACAGCTCC (11) 2.3 0.0023 P8 GC+1d culture TTTTAAAAAA (26) 2.3 0.0023 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture GACTATATAT (3) 16.4 0.0164 P8 GC+SHH+1d culture TTTTAAAAAA (26) 10.5 0.0105 P8 GC+SHH+1d culture AAGAGGAGAA (10) 1.2 0.0012 P8 GC+SHH+1d culture GGACAGCTCC (11) 1.2 0.0012 P8 GC+SHH+1d culture TTGCCGCAGT (2) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts TACTTCAAAA (3) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex TACTTCAAAA (3) 4.5 0.0045 P1 cortex TTTTAAAAAA (26) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GACTATATAT (3) 25.4 0.0254 Hypothalamus TACTTCAAAA (3) 1.8 0.0018 Hypothalamus TTGCCGCAGT (2) 1.8 0.0018 Hypothalamus TTTTAAAAAA (26) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GACTATATAT (3) 13.1 0.0131 E12.5 retina TACTTCAAAA (3) 1.9 0.0019 E12.5 retina TTTTAAAAAA (26) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GACTATATAT (3) 14.6 0.0146 E14.5 retina TTTTAAAAAA (26) 3.6 0.0036 E14.5 retina TACTTCAAAA (3) 1.8 0.0018 E14.5 retina TTGCCGCAGT (2) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina GACTATATAT (3) 23.5 0.0235 E16.5 retina TTGCCGCAGT (2) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GACTATATAT (3) 29.1 0.0291 E18.5 retina TTTTAAAAAA (26) 9.1 0.0091 E18.5 retina TACTTCAAAA (3) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GACTATATAT (3) 3.9 0.0039 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GACTATATAT (3) 15.8 0.0158 P2.5 retina TTTTAAAAAA (26) 5.3 0.0053 P2.5 retina TACTTCAAAA (3) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GACTATATAT (3) 17.8 0.0178 P4.5 retina TTTTAAAAAA (26) 4 0.004 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GACTATATAT (3) 10 0.01 P6.5 retina TTTTAAAAAA (26) 5 0.005 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GACTATATAT (3) 5.6 0.0056 P10.5 crx- retina ATGATAAACT (6) 1.9 0.0019 P10.5 crx- retina TTTTAAAAAA (26) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GACTATATAT (3) 9.6 0.0096 P10.5 crx+ retina TTTTAAAAAA (26) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GACTATATAT (3) 5.6 0.0056 Adult retinal ATGATAAACT (6) 1.9 0.0019 Adult retinal TTGCCGCAGT (2) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GACTATATAT (3) 3.8 0.0038 ONL TTTTAAAAAA (26) 3.8 0.0038 ONL TACTTCAAAA (3) 1.9 0.0019