Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24210	Bcat2	branched chain aminotransferase 2, mitochondrial	7	7 23.0 cM	12036
Gene Ontology	branched chain family amino acid biosynthesis | branched chain family amino acid catabolism | branched chain family amino acid metabolism | branched-chain-amino-acid transaminase activity | catalytic activity | extracellular space | metabolism | mitochondrion | mitochondrion | transaminase activity | transferase activity
Human Homolog	BCAT2[branched chain aminotransferase 2, mitochondrial]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCCCTTGTG (4) 1.6 0.0016 P8 Cb GC GCTGCAGCCA (8) 1.6 0.0016 Cb medulloblastoma GGGGAAAAAA (28) 4.6 0.0046 Cb medulloblastoma ACCCCTTGTG (4) 2.3 0.0023 Cb medulloblastoma GAGAACGGCC 2.3 0.0023 P8 GC+1d culture ACCCCTTGTG (4) 5.7 0.0057 P8 GC+1d culture GCTGCAGCCA (8) 1.1 0.0011 P8 GC+1d culture GGGGAAAAAA (28) 1.1 0.0011 P8 GC+SHH+1d culture ACCCCTTGTG (4) 3.5 0.0035 P8 GC+SHH+1d culture CAATTTGGAC 1.2 0.0012 P8 GC+SHH+1d culture GCTGCAGCCA (8) 1.2 0.0012 3T3 fibroblasts ACCCCTTGTG (4) 14 0.014 3T3 fibroblasts CAATTTGGAC 3.5 0.0035 E15 cortex ACCCCTTGTG (4) 4.9 0.0049 E15 cortex GGGGAAAAAA (28) 4.9 0.0049 P1 cortex ACCCCTTGTG (4) 9.1 0.0091 E12.5 retina ACCCCTTGTG (4) 1.9 0.0019 E12.5 retina GGGGAAAAAA (28) 1.9 0.0019 E14.5 retina GAGAACGGCC 1.8 0.0018 E16.5 retina GGGGAAAAAA (28) 1.8 0.0018 E18.5 retina GGGGAAAAAA (28) 3.6 0.0036 P0.5 retina ACCCCTTGTG (4) 5.9 0.0059 P0.5 retina GAGAACGGCC 3.9 0.0039 P0.5 retina CAATTTGGAC 2 0.002 P0.5 retina GCTGCAGCCA (8) 2 0.002 P4.5 retina GCTGCAGCCA (8) 2 0.002 P6.5 retina ACCCCTTGTG (4) 1.7 0.0017 P6.5 retina GGGGAAAAAA (28) 1.7 0.0017 P10.5 crx- retina ACCCCTTGTG (4) 1.9 0.0019 P10.5 crx+ retina CAATTTGGAC 1.9 0.0019 P10.5 crx+ retina GCTGCAGCCA (8) 1.9 0.0019 Adult retinal ACCCCTTGTG (4) 3.7 0.0037 ONL CAATTTGGAC 1.9 0.0019