Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24214	C77949	expressed sequence C77949	5		97227
Mm.24214	Foxk1	forkhead box K1	5	5 82.0 cM	17425
Gene Ontology	cell differentiation | DNA binding | nucleus | regulation of transcription from Pol II promoter | regulation of transcription, DNA-dependent | transcription factor activity
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 8 In Situ Hybridization Images

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SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATCCGCACCC (3) 9.8 0.0098 P8 Cb GC ATATGTTTAA (2) 1.6 0.0016 Cb medulloblastoma ATCCGCACCC (3) 13.9 0.0139 Cb medulloblastoma CGCGCGCGCA (6) 9.2 0.0092 P8 GC+1d culture ATCCGCACCC (3) 27.4 0.0274 P8 GC+1d culture CGCGCGCGCA (6) 9.1 0.0091 P8 GC+SHH+1d culture ATCCGCACCC (3) 17.6 0.0176 P8 GC+SHH+1d culture CGCGCGCGCA (6) 3.5 0.0035 P8 GC+SHH+1d culture ATATGTTTAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GCCCAGCGCT (3) 1.2 0.0012 3T3 fibroblasts ATCCGCACCC (3) 31.5 0.0315 E15 cortex ATCCGCACCC (3) 34.6 0.0346 E15 cortex CGCGCGCGCA (6) 4.9 0.0049 P1 cortex ATCCGCACCC (3) 40.9 0.0409 Hypothalamus ATCCGCACCC (3) 7.2 0.0072 Hypothalamus CGCGCGCGCA (6) 1.8 0.0018 Hypothalamus TTTTAAAGCT (4) 1.8 0.0018 E12.5 retina GCCCAGCGCT (3) 1.9 0.0019 E14.5 retina ATCCGCACCC (3) 1.8 0.0018 E16.5 retina ATCCGCACCC (3) 1.8 0.0018 E18.5 retina CGCGCGCGCA (6) 3.6 0.0036 E18.5 retina ATCCGCACCC (3) 1.8 0.0018 P0.5 retina ATCCGCACCC (3) 3.9 0.0039 P0.5 retina ATATGTTTAA (2) 2 0.002 P2.5 retina ATCCGCACCC (3) 3.5 0.0035 P4.5 retina ATCCGCACCC (3) 9.9 0.0099 P6.5 retina CGCGCGCGCA (6) 15 0.015 P6.5 retina ATCCGCACCC (3) 8.3 0.0083 P6.5 retina GACACTCCTG (4) 5 0.005 P6.5 retina TTTTAAAGCT (4) 1.7 0.0017 P10.5 crx- retina ATCCGCACCC (3) 20.4 0.0204 P10.5 crx- retina CGCGCGCGCA (6) 9.3 0.0093 P10.5 crx- retina TTTTAAAGCT (4) 3.7 0.0037 P10.5 crx+ retina CGCGCGCGCA (6) 123 0.123 P10.5 crx+ retina ATCCGCACCC (3) 19.2 0.0192 Adult retinal CGCGCGCGCA (6) 222.2 0.2222 Adult retinal ATCCGCACCC (3) 3.7 0.0037 Adult retinal GACACTCCTG (4) 1.9 0.0019 Adult retinal TTTTAAAGCT (4) 1.9 0.0019 ONL CGCGCGCGCA (6) 243.3 0.2433 ONL ATCCGCACCC (3) 5.7 0.0057 ONL GCCCAGCGCT (3) 1.9 0.0019