Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.242881
BC031575
cDNA sequence BC031575
16
223989
Human Homolog
LKAP[limkain b1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 61 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
GCACACTGAA
(
4
)
8.2
0.0082
P8 Cb GC
TTGGTTGTCT (
2
)
1.6
0.0016
P8 Cb GC
TTGTGGTGAC (
26
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
TTGTGGTGAC (
26
)
6.9
0.0069
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
TTGTGGTGAC (
26
)
9.1
0.0091
P8 GC+1d culture
GCACACTGAA
(
4
)
4.6
0.0046
P8 GC+1d culture
TTGGTTGTCT (
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
TTGTGGTGAC (
26
)
5.9
0.0059
P8 GC+SHH+1d culture
GCACACTGAA
(
4
)
4.7
0.0047
P8 GC+SHH+1d culture
TTGGTTGTCT (
2
)
2.3
0.0023
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
GCACACTGAA
(
4
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
GCACACTGAA
(
4
)
14.8
0.0148
E15 cortex
TTGGTTGTCT (
2
)
4.9
0.0049
E15 cortex
TTGTGGTGAC (
26
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
TTGTGGTGAC (
26
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
TTGTGGTGAC (
26
)
7.2
0.0072
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
GCACACTGAA
(
4
)
7.5
0.0075
E12.5 retina
TTGTGGTGAC (
26
)
3.8
0.0038
E12.5 retina
TTGGTTGTCT (
2
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
GCACACTGAA
(
4
)
14.6
0.0146
E14.5 retina
TTGTGGTGAC (
26
)
7.3
0.0073
E14.5 retina
GAAAAGGAGA (
7
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
TTGTGGTGAC (
26
)
14.5
0.0145
E16.5 retina
GCACACTGAA
(
4
)
5.4
0.0054
E16.5 retina
TTGGTTGTCT (
2
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
GCACACTGAA
(
4
)
10.9
0.0109
E18.5 retina
TTGTGGTGAC (
26
)
9.1
0.0091
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
TTGTGGTGAC (
26
)
7.9
0.0079
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
TTGTGGTGAC (
26
)
14.1
0.0141
P2.5 retina
GCACACTGAA
(
4
)
8.8
0.0088
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
TTGTGGTGAC (
26
)
19.8
0.0198
P4.5 retina
GCACACTGAA
(
4
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
TTGTGGTGAC (
26
)
11.7
0.0117
P6.5 retina
GCACACTGAA
(
4
)
5
0.005
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
TTGTGGTGAC (
26
)
9.3
0.0093
P10.5 crx- retina
GCACACTGAA
(
4
)
3.7
0.0037
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
TTGTGGTGAC (
26
)
23.1
0.0231
P10.5 crx+ retina
GCACACTGAA
(
4
)
3.8
0.0038
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
TTGTGGTGAC (
26
)
7.4
0.0074
Adult retinal
GCACACTGAA
(
4
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
TTGTGGTGAC (
26
)
5.7
0.0057
