Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.243234	Psmd2	proteasome (prosome, macropain) 26S subunit, non-ATPase, 2	16	16 A3	21762
Gene Ontology	cytosol | regulation of cell cycle
Human Homolog	PSMD2[proteasome (prosome, macropain) 26S subunit, non-ATPase, 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 9 In Situ Hybridization Images

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SAGE Tags

Total 138 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGAGCGGGC 8.2 0.0082 P8 Cb GC TGTGGGAACC (4) 6.5 0.0065 P8 Cb GC CAGCCTCGGA 3.3 0.0033 P8 Cb GC GAGGTGGCAG (4) 1.6 0.0016 P8 Cb GC GCTAAAAAAA (7) 1.6 0.0016 P8 Cb GC GCTCACAGAG (4) 1.6 0.0016 P8 Cb GC GGCCAACAAG (3) 1.6 0.0016 P8 Cb GC GGCCAGAAAG (6) 1.6 0.0016 P8 Cb GC GTGGGCAGTG (4) 1.6 0.0016 Cb medulloblastoma GCTAAAAAAA (7) 9.2 0.0092 Cb medulloblastoma TGTGGGAACC (4) 9.2 0.0092 Cb medulloblastoma GGGAGCGGGC 6.9 0.0069 Cb medulloblastoma GCTCACAGAG (4) 4.6 0.0046 Cb medulloblastoma GAGGTGGCAG (4) 2.3 0.0023 Cb medulloblastoma GCCCTGGGGA (7) 2.3 0.0023 Cb medulloblastoma GCTCACAATG (2) 2.3 0.0023 P8 GC+1d culture GGGAGCGGGC 14.8 0.0148 P8 GC+1d culture TGTGGGAACC (4) 13.7 0.0137 P8 GC+1d culture GCTCACAGAG (4) 2.3 0.0023 P8 GC+1d culture GCCCTGGGGA (7) 1.1 0.0011 P8 GC+1d culture GCTAAAAAAA (7) 1.1 0.0011 P8 GC+1d culture GGAACTGGTA 1.1 0.0011 P8 GC+SHH+1d culture GGGAGCGGGC 10.5 0.0105 P8 GC+SHH+1d culture TGTGGGAACC (4) 8.2 0.0082 P8 GC+SHH+1d culture GCTCACAGAG (4) 4.7 0.0047 P8 GC+SHH+1d culture GCTAAAAAAA (7) 2.3 0.0023 P8 GC+SHH+1d culture GGGGGCAGGG (6) 2.3 0.0023 P8 GC+SHH+1d culture GAGGTGGCAG (4) 1.2 0.0012 P8 GC+SHH+1d culture GCTCACAATG (2) 1.2 0.0012 P8 GC+SHH+1d culture GGAACTGGTA 1.2 0.0012 P8 GC+SHH+1d culture GGCCAACAAG (3) 1.2 0.0012 P8 GC+SHH+1d culture GGCCAGAAAG (6) 1.2 0.0012 3T3 fibroblasts GGGAGCGGGC 63.1 0.0631 3T3 fibroblasts GTCTCAATGG (8) 7 0.007 3T3 fibroblasts GCTAAAAAAA (7) 3.5 0.0035 3T3 fibroblasts GCTCACAGAG (4) 3.5 0.0035 3T3 fibroblasts TGTGGGAACC (4) 3.5 0.0035 E15 cortex GGGAGCGGGC 34.6 0.0346 E15 cortex GAGGTGGCAG (4) 4.9 0.0049 E15 cortex GCCCTGGGGA (7) 4.9 0.0049 E15 cortex GCTAAAAAAA (7) 4.9 0.0049 E15 cortex GCTCACAGAG (4) 4.9 0.0049 P1 cortex GCTCACAGAG (4) 4.5 0.0045 P1 cortex GGCCAGAAAG (6) 4.5 0.0045 P1 cortex GGGAGCGGGC 4.5 0.0045 P1 cortex GTCTCAATGG (8) 4.5 0.0045 Hypothalamus TGTGGGAACC (4) 18.1 0.0181 Hypothalamus GCTAAAAAAA (7) 9.1 0.0091 Hypothalamus GGGAGCGGGC 9.1 0.0091 Hypothalamus GTGGGCAGTG (4) 3.6 0.0036 Hypothalamus CAGCCTCGGA 1.8 0.0018 Hypothalamus GGAACTGGTA 1.8 0.0018 E12.5 retina GGGAGCGGGC 16.9 0.0169 E12.5 retina GCTCACAGAG (4) 5.6 0.0056 E12.5 retina GAAACTTGGG (13) 3.8 0.0038 E12.5 retina GGGGGCAGGG (6) 3.8 0.0038 E12.5 retina GTGGGCAGTG (4) 3.8 0.0038 E12.5 retina TGTGGGAACC (4) 1.9 0.0019 E14.5 retina GAGCCCAAGG 5.5 0.0055 E14.5 retina TGTGGGAACC (4) 3.6 0.0036 E14.5 retina GAAACTTGGG (13) 1.8 0.0018 E14.5 retina GAGCCCAAAG 1.8 0.0018 E14.5 retina GCTCACAGAG (4) 1.8 0.0018 E14.5 retina GGGAGCGGGC 1.8 0.0018 E14.5 retina GTCTCAATGG (8) 1.8 0.0018 E14.5 retina GTGGGCAGTG (4) 1.8 0.0018 E16.5 retina GTCTCAATGG (8) 3.6 0.0036 E16.5 retina TGTGGGAACC (4) 3.6 0.0036 E16.5 retina GCTAAAAAAA (7) 1.8 0.0018 E16.5 retina GCTCACAATG (2) 1.8 0.0018 E16.5 retina GCTCACAGAG (4) 1.8 0.0018 E16.5 retina GGAACTGGTG (4) 1.8 0.0018 E16.5 retina GGGAGCGGGC 1.8 0.0018 E16.5 retina GGGGGCAGGG (6) 1.8 0.0018 E16.5 retina GTGGGCAGTG (4) 1.8 0.0018 E18.5 retina TGTGGGAACC (4) 5.5 0.0055 E18.5 retina GCCCTGGGGA (7) 3.6 0.0036 E18.5 retina GGGGGCAGGG (6) 3.6 0.0036 E18.5 retina GCTCACAATG (2) 1.8 0.0018 E18.5 retina GCTCACAGAG (4) 1.8 0.0018 E18.5 retina GGGAGCGGGC 1.8 0.0018 E18.5 retina GTGGGCAGTG (4) 1.8 0.0018 P0.5 retina GGGAGCGGGC 17.7 0.0177 P0.5 retina GCTCACAGAG (4) 7.9 0.0079 P0.5 retina TGTGGGAACC (4) 3.9 0.0039 P0.5 retina GCTCACAATG (2) 2 0.002 P0.5 retina GGAACTGGTG (4) 2 0.002 P2.5 retina TGTGGGAACC (4) 7 0.007 P2.5 retina GGGAGCGGGC 3.5 0.0035 P2.5 retina GTGGGCAGTG (4) 3.5 0.0035 P2.5 retina GAAACTTGGG (13) 1.8 0.0018 P2.5 retina GCCCTGGGGA (7) 1.8 0.0018 P2.5 retina GCTCACAATG (2) 1.8 0.0018 P2.5 retina GCTCACAGAG (4) 1.8 0.0018 P2.5 retina GGAACTGGTG (4) 1.8 0.0018 P2.5 retina GGGGGCAGGG (6) 1.8 0.0018 P2.5 retina GTCTCAATGG (8) 1.8 0.0018 P4.5 retina TGTGGGAACC (4) 13.9 0.0139 P4.5 retina GGGAGCGGGC 5.9 0.0059 P4.5 retina GCTCACAATG (2) 4 0.004 P4.5 retina GCTAAAAAAA (7) 2 0.002 P4.5 retina GCTCACAGAG (4) 2 0.002 P4.5 retina GGGGGCAGGG (6) 2 0.002 P4.5 retina GTGGGCAGTG (4) 2 0.002 P6.5 retina GGGAGCGGGC 18.3 0.0183 P6.5 retina TGTGGGAACC (4) 6.7 0.0067 P6.5 retina GTCTCAATGG (8) 3.3 0.0033 P6.5 retina GCTCACAATG (2) 1.7 0.0017 P6.5 retina GGAACTGGTG (4) 1.7 0.0017 P6.5 retina GGCCAGAAAG (6) 1.7 0.0017 P6.5 retina GGGGGCAGGG (6) 1.7 0.0017 P10.5 crx- retina TGTGGGAACC (4) 7.4 0.0074 P10.5 crx- retina GCTCACAATG (2) 5.6 0.0056 P10.5 crx- retina GCTCACAGAG (4) 5.6 0.0056 P10.5 crx- retina GGCCAACAAG (3) 1.9 0.0019 P10.5 crx- retina GGGAGCGGGC 1.9 0.0019 P10.5 crx- retina GTCTCAATGG (8) 1.9 0.0019 P10.5 crx- retina GTGGGCAGTG (4) 1.9 0.0019 P10.5 crx+ retina GGGAGCGGGC 9.6 0.0096 P10.5 crx+ retina GCTCACAATG (2) 3.8 0.0038 P10.5 crx+ retina GCTCACAGAG (4) 3.8 0.0038 P10.5 crx+ retina GTGGGCAGTG (4) 3.8 0.0038 P10.5 crx+ retina TGTGGGAACC (4) 3.8 0.0038 P10.5 crx+ retina GAGCCCAAAG 1.9 0.0019 P10.5 crx+ retina GCCCTGGGGA (7) 1.9 0.0019 Adult retinal GGGAGCGGGC 14.8 0.0148 Adult retinal GCTCACAGAG (4) 7.4 0.0074 Adult retinal GCCCTGGGGA (7) 5.6 0.0056 Adult retinal GAAACTTGGG (13) 3.7 0.0037 Adult retinal GAGCCCAAAG 1.9 0.0019 Adult retinal GAGGTGGCAG (4) 1.9 0.0019 Adult retinal TGTGGGAACC (4) 1.9 0.0019 ONL GGGAGCGGGC 5.7 0.0057 ONL GAGCCCAAAG 1.9 0.0019 ONL GAGGTGGCAG (4) 1.9 0.0019 ONL GGCCAACAAG (3) 1.9 0.0019 ONL GTGGGCAGTG (4) 1.9 0.0019 ONL TGTGGGAACC (4) 1.9 0.0019