Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24350	H1f0	H1 histone family, member 0	15	15 46.75 cM	14958
Gene Ontology	chromosome | chromosome organization and biogenesis (sensu Eukarya) | DNA binding | nucleosome | nucleosome assembly | nucleus
Human Homolog	H1F0[H1 histone family, member 0]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 96 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTATATG (5) 17.9 0.0179 P8 Cb GC ACCGACAACT (3) 8.2 0.0082 P8 Cb GC CACACAATCC 8.2 0.0082 P8 Cb GC GCACCTCTAA 3.3 0.0033 P8 Cb GC ATCGTGGCTG 1.6 0.0016 P8 Cb GC GAGGAGAAAC (3) 1.6 0.0016 P8 Cb GC TGGAATGACT (3) 1.6 0.0016 Cb medulloblastoma ACCGACAACT (3) 13.9 0.0139 Cb medulloblastoma CACACAATCC 4.6 0.0046 Cb medulloblastoma TGTGTATATG (5) 4.6 0.0046 Cb medulloblastoma AAGGCAAGAA (5) 2.3 0.0023 Cb medulloblastoma GAGGAGAAAC (3) 2.3 0.0023 P8 GC+1d culture TGTGTATATG (5) 32 0.032 P8 GC+1d culture CACACAATCC 14.8 0.0148 P8 GC+1d culture ACCGACAACT (3) 11.4 0.0114 P8 GC+1d culture ATCGTGGCTG 8 0.008 P8 GC+1d culture GCACCTCTAA 3.4 0.0034 P8 GC+1d culture AAGGCAAGAA (5) 1.1 0.0011 P8 GC+1d culture GAGGAGAAAC (3) 1.1 0.0011 P8 GC+1d culture TGATGCTCTT (2) 1.1 0.0011 P8 GC+SHH+1d culture TGTGTATATG (5) 25.8 0.0258 P8 GC+SHH+1d culture CACACAATCC 12.9 0.0129 P8 GC+SHH+1d culture ACCGACAACT (3) 10.5 0.0105 P8 GC+SHH+1d culture ATCGTGGCTG 5.9 0.0059 3T3 fibroblasts ATCGTGGCTG 24.5 0.0245 3T3 fibroblasts TGTGTATATG (5) 10.5 0.0105 3T3 fibroblasts ACCGACAACT (3) 7 0.007 3T3 fibroblasts CACACAATCC 3.5 0.0035 3T3 fibroblasts GAGGAGAAAC (3) 3.5 0.0035 3T3 fibroblasts TGATGCTCTT (2) 3.5 0.0035 3T3 fibroblasts TGGAATGACT (3) 3.5 0.0035 E15 cortex ATCGTGGCTG 4.9 0.0049 P1 cortex TGTGTATATG (5) 13.6 0.0136 P1 cortex ACCGACAACT (3) 4.5 0.0045 P1 cortex CACACAATCC 4.5 0.0045 P1 cortex GCACCTCTAA 4.5 0.0045 P1 cortex TGATGCTCTT (2) 4.5 0.0045 Hypothalamus GAGGAGAAAC (3) 3.6 0.0036 Hypothalamus ACCGACAACT (3) 1.8 0.0018 Hypothalamus CACACAATCC 1.8 0.0018 Hypothalamus TGGAATGACT (3) 1.8 0.0018 Hypothalamus TGTGTATATG (5) 1.8 0.0018 E12.5 retina CACACAATCC 13.1 0.0131 E12.5 retina TGTGTATATG (5) 5.6 0.0056 E12.5 retina ACCGACAACT (3) 3.8 0.0038 E12.5 retina GCACCTCTAA 1.9 0.0019 E14.5 retina ACCGACAACT (3) 10.9 0.0109 E14.5 retina TGTGTATATG (5) 7.3 0.0073 E14.5 retina AAGGCAAGAA (5) 1.8 0.0018 E14.5 retina CACACAATCC 1.8 0.0018 E16.5 retina TGTGTATATG (5) 21.7 0.0217 E16.5 retina ACCGACAACT (3) 12.7 0.0127 E16.5 retina CACACAATCC 9.1 0.0091 E16.5 retina AAGGCAAGAA (5) 1.8 0.0018 E18.5 retina ACCGACAACT (3) 9.1 0.0091 E18.5 retina TGTGTATATG (5) 9.1 0.0091 E18.5 retina CACACAATCC 1.8 0.0018 E18.5 retina GAGGAGAAAC (3) 1.8 0.0018 P0.5 retina TGTGTATATG (5) 27.5 0.0275 P0.5 retina ATCGTGGCTG 17.7 0.0177 P0.5 retina CACACAATCC 13.7 0.0137 P0.5 retina ACCGACAACT (3) 7.9 0.0079 P0.5 retina AAGGCAAGAA (5) 2 0.002 P0.5 retina GAGGAGAAAC (3) 2 0.002 P0.5 retina GCACCTCTAA 2 0.002 P0.5 retina TGATGCTCTT (2) 2 0.002 P0.5 retina TGGAATGACT (3) 2 0.002 P2.5 retina CACACAATCC 14.1 0.0141 P2.5 retina TGTGTATATG (5) 14.1 0.0141 P2.5 retina ACCGACAACT (3) 7 0.007 P2.5 retina ATCGTGGCTG 3.5 0.0035 P2.5 retina CAGACAAGAA (2) 1.8 0.0018 P2.5 retina TGGGTTCCAG (5) 1.8 0.0018 P4.5 retina TGTGTATATG (5) 11.9 0.0119 P4.5 retina ACCGACAACT (3) 5.9 0.0059 P4.5 retina CACACAATCC 5.9 0.0059 P6.5 retina CACACAATCC 5 0.005 P6.5 retina TGTGTATATG (5) 5 0.005 P6.5 retina TGGAATGACT (3) 3.3 0.0033 P6.5 retina ACCGACAACT (3) 1.7 0.0017 P10.5 crx- retina ACCGACAACT (3) 3.7 0.0037 P10.5 crx- retina CACACAATCC 3.7 0.0037 P10.5 crx- retina TGTGTATATG (5) 3.7 0.0037 P10.5 crx+ retina ATCGTGGCTG 3.8 0.0038 P10.5 crx+ retina CAGACAAGAA (2) 3.8 0.0038 P10.5 crx+ retina ACCGACAACT (3) 1.9 0.0019 P10.5 crx+ retina CACACAATCC 1.9 0.0019 P10.5 crx+ retina GCACCTCTAA 1.9 0.0019 P10.5 crx+ retina TGGGTTCCAG (5) 1.9 0.0019 Adult retinal ACCGACAACT (3) 1.9 0.0019 Adult retinal ATCGTGGCTG 1.9 0.0019 Adult retinal GCACCTCTAA 1.9 0.0019 Adult retinal TGGGTTCCAG (5) 1.9 0.0019 ONL ACCGACAACT (3) 5.7 0.0057 ONL TGTGTATATG (5) 3.8 0.0038 ONL GCACCTCTAA 1.9 0.0019