Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.244047
3110068G20Rik
RIKEN cDNA 3110068G20 gene
12
73198
Mm.244047
Nin
ninein
12
18080
Gene Ontology
calcium ion binding
|
GTP binding
Human Homolog
NIN[ninein (GSK3B interacting protein)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
AAAGACTTTG
(
3
)
1.6
0.0016
P8 Cb GC
ACTTAAAGGA
(
2
)
1.6
0.0016
P8 Cb GC
CTGATAGTCA
(
4
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
AAAGACTTTG
(
3
)
2.3
0.0023
Cb medulloblastoma
TGGAAAATAA (
5
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
AAAGACTTTG
(
3
)
1.1
0.0011
P8 GC+1d culture
CACACGCACA (
15
)
1.1
0.0011
P8 GC+1d culture
TGGAAAATAA (
5
)
1.1
0.0011
P8 GC+1d culture
TTTTATATAA
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
ACTTAAAGGA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
AAAGACTTTG
(
3
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
CTGATAGTCA
(
4
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
AAAGACTTTG
(
3
)
9.9
0.0099
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
TTTTATATAA
(
4
)
9.1
0.0091
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
CACACGCACA (
15
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
AAAGACTTTG
(
3
)
3.8
0.0038
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
CTGATAGTCA
(
4
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
AAAGACTTTG
(
3
)
3.6
0.0036
E16.5 retina
ATTACGCCAA (
233
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TGGAAAATAA (
5
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
AAAGACTTTG
(
3
)
3.9
0.0039
P0.5 retina
ATTACGCCAA (
233
)
2
0.002
P0.5 retina
CACACGCACA (
15
)
2
0.002
P0.5 retina
CTGATAGTCA
(
4
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
AAAGACTTTG
(
3
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
CTGATAGTCA
(
4
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
AAAGACTTTG
(
3
)
9.3
0.0093
P10.5 crx- retina
ACTTAAAGGA
(
2
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
CACACGCACA (
15
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
ATTACGCCAA (
233
)
3.7
0.0037
Adult retinal
CTGATAGTCA
(
4
)
3.7
0.0037
Adult retinal
AAAGACTTTG
(
3
)
1.9
0.0019
Adult retinal
CACACGCACA (
15
)
1.9
0.0019
Adult retinal
TGGAAAATAA (
5
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
CACACGCACA (
15
)
5.7
0.0057
ONL
CTGATAGTCA
(
4
)
1.9
0.0019
ONL
TGGAAAATAA (
5
)
1.9
0.0019
