Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.244068
Arhgef7
Rho guanine nucleotide exchange factor (GEF7)
8
54126
Mm.244068
AU019559
expressed sequence AU019559
8
102225
Mm.244068
4933413I22Rik
RIKEN cDNA 4933413I22 gene
8
71140
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 69 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCAACCCCCA
(
4
)
3.3
0.0033
P8 Cb GC
GTCTGGGGGG (
9
)
3.3
0.0033
P8 Cb GC
GGAATCTTAC (
4
)
1.6
0.0016
Cb medulloblastoma
GTCTGGGGGG (
9
)
11.6
0.0116
Cb medulloblastoma
CCAACCCCCA
(
4
)
6.9
0.0069
Cb medulloblastoma
CTGATAGCAC
(
3
)
2.3
0.0023
P8 GC+1d culture
CCAACCCCCA
(
4
)
11.4
0.0114
P8 GC+1d culture
GTCTGGGGGG (
9
)
8
0.008
P8 GC+1d culture
CAGGAAAAAC (
4
)
4.6
0.0046
P8 GC+1d culture
CTGATAGCAC
(
3
)
1.1
0.0011
P8 GC+1d culture
GGAATCTTAC (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CCAACCCCCA
(
4
)
7
0.007
P8 GC+SHH+1d culture
CAGGAAAAAC (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
CTGCGGTGTA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GGAATCTTAC (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GTCTGGGGGG (
9
)
1.2
0.0012
3T3 fibroblasts
GGCAGCAGTG (
7
)
3.5
0.0035
E15 cortex
CTGATAGCAC
(
3
)
4.9
0.0049
E15 cortex
GGCAGACAGT (
5
)
4.9
0.0049
E15 cortex
GGCAGCAGTG (
7
)
4.9
0.0049
E15 cortex
GTCTGGGGGG (
9
)
4.9
0.0049
P1 cortex
GGCAGACAGT (
5
)
13.6
0.0136
P1 cortex
CCAACCCCCA
(
4
)
9.1
0.0091
P1 cortex
GTCTGGGGGG (
9
)
4.5
0.0045
Hypothalamus
GGAATCTTAC (
4
)
5.4
0.0054
Hypothalamus
GTCTGGGGGG (
9
)
5.4
0.0054
Hypothalamus
AAGGGGGTTG
(
4
)
1.8
0.0018
Hypothalamus
CTGCGGTGTA
(
4
)
1.8
0.0018
Hypothalamus
GGCAGACAGT (
5
)
1.8
0.0018
E12.5 retina
CAGTGACTGA
(
6
)
1.9
0.0019
E12.5 retina
CCAACCCCCA
(
4
)
1.9
0.0019
E12.5 retina
GGAATCTTAC (
4
)
1.9
0.0019
E14.5 retina
AAGGGGGTTG
(
4
)
1.8
0.0018
E14.5 retina
GGAATCTTAC (
4
)
1.8
0.0018
E16.5 retina
CCAACCCCCA
(
4
)
3.6
0.0036
E18.5 retina
GGCAGACAGT (
5
)
9.1
0.0091
E18.5 retina
GGAATCTTAC (
4
)
3.6
0.0036
E18.5 retina
CCAACCCCCA
(
4
)
1.8
0.0018
P0.5 retina
CCAACCCCCA
(
4
)
3.9
0.0039
P0.5 retina
CTGATAGCAC
(
3
)
3.9
0.0039
P0.5 retina
GGAATCTTAC (
4
)
3.9
0.0039
P0.5 retina
CTGCGGTGTA
(
4
)
2
0.002
P2.5 retina
CCAACCCCCA
(
4
)
5.3
0.0053
P2.5 retina
GGAATCTTAC (
4
)
3.5
0.0035
P2.5 retina
GTCTGGGGGG (
9
)
3.5
0.0035
P2.5 retina
CTGCGGTGTA
(
4
)
1.8
0.0018
P4.5 retina
GTCTGGGGGG (
9
)
9.9
0.0099
P4.5 retina
CCAACCCCCA
(
4
)
4
0.004
P4.5 retina
CAGGAAAAAC (
4
)
2
0.002
P4.5 retina
GGAATCTTAC (
4
)
2
0.002
P6.5 retina
CCAACCCCCA
(
4
)
6.7
0.0067
P6.5 retina
CTGCGGTGTA
(
4
)
1.7
0.0017
P6.5 retina
GGCAGACAGT (
5
)
1.7
0.0017
P6.5 retina
GGCAGCAGTG (
7
)
1.7
0.0017
P10.5 crx- retina
GTCTGGGGGG (
9
)
1.9
0.0019
P10.5 crx+ retina
CAGGAAAAAC (
4
)
5.8
0.0058
P10.5 crx+ retina
CCAACCCCCA
(
4
)
5.8
0.0058
P10.5 crx+ retina
GGAATCTTAC (
4
)
5.8
0.0058
P10.5 crx+ retina
GTCTGGGGGG (
9
)
5.8
0.0058
P10.5 crx+ retina
CTGATAGCAC
(
3
)
3.8
0.0038
P10.5 crx+ retina
CTTTCTTTGT (
4
)
3.8
0.0038
Adult retinal
GTCTGGGGGG (
9
)
9.3
0.0093
Adult retinal
CAGGAAAAAC (
4
)
3.7
0.0037
Adult retinal
CCAACCCCCA
(
4
)
3.7
0.0037
Adult retinal
CTTTCTTTGT (
4
)
1.9
0.0019
Adult retinal
GGAATCTTAC (
4
)
1.9
0.0019
ONL
CAGGAAAAAC (
4
)
3.8
0.0038
ONL
AAGGGGGTTG
(
4
)
1.9
0.0019
ONL
CAGTGACTGA
(
6
)
1.9
0.0019
