Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.244183	Usp52	ubiquitin specific protease 52	10		103135
Gene Ontology	3'-5' exoribonuclease activity | cytoplasm | exonuclease activity | hydrolase activity | mRNA catabolism, exonucleolytic | peptidase activity | poly(A) tail shortening
Human Homolog	USP52[ubiquitin specific protease 52]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGCCAAGGA (4) 3.3 0.0033 P8 Cb GC ATGGTGACTC (3) 1.6 0.0016 P8 Cb GC TTTTAGTAAG (2) 1.6 0.0016 Cb medulloblastoma GTGCCAAGGA (4) 9.2 0.0092 Cb medulloblastoma TGCCCAGGAC (9) 2.3 0.0023 Cb medulloblastoma TTTTATAAAA (5) 2.3 0.0023 P8 GC+1d culture TTTTAGTAAG (2) 4.6 0.0046 P8 GC+1d culture TGCCCAGGAC (9) 3.4 0.0034 P8 GC+1d culture TTTTATAAAA (5) 2.3 0.0023 P8 GC+1d culture ATGGTGACTC (3) 1.1 0.0011 P8 GC+1d culture GTGCCAAGGA (4) 1.1 0.0011 P8 GC+SHH+1d culture GTGCCAAGGA (4) 7 0.007 P8 GC+SHH+1d culture TTTTATAAAA (5) 4.7 0.0047 P8 GC+SHH+1d culture ATGGTGACTC (3) 2.3 0.0023 P8 GC+SHH+1d culture TGCCCAGGAC (9) 2.3 0.0023 P8 GC+SHH+1d culture ACCAGCATTG (2) 1.2 0.0012 3T3 fibroblasts ACCAGCATTG (2) 7 0.007 3T3 fibroblasts ATGGTGACTC (3) 3.5 0.0035 3T3 fibroblasts TGCCCAGGAC (9) 3.5 0.0035 E15 cortex GTGCCAAGGA (4) 4.9 0.0049 E15 cortex TGCCCAGGAC (9) 4.9 0.0049 P1 cortex GTGCCAAGGA (4) 9.1 0.0091 P1 cortex TTTTAGTAAG (2) 9.1 0.0091 P1 cortex TTTTATAAAA (5) 9.1 0.0091 P1 cortex AATTTGATGC (5) 4.5 0.0045 P1 cortex GAGAAATCTT (3) 4.5 0.0045 Hypothalamus TTTTAGTAAG (2) 7.2 0.0072 Hypothalamus GTGCCAAGGA (4) 5.4 0.0054 Hypothalamus TGCCCAGGAC (9) 5.4 0.0054 Hypothalamus ACCAGCATTG (2) 1.8 0.0018 E12.5 retina GTGCCAAGGA (4) 3.8 0.0038 E12.5 retina ATGGTGACTC (3) 1.9 0.0019 E12.5 retina TTTTATAAAA (5) 1.9 0.0019 E14.5 retina ATGGTGACTC (3) 5.5 0.0055 E14.5 retina GTGCCAAGGA (4) 5.5 0.0055 E14.5 retina ACAGCATTGA (3) 1.8 0.0018 E14.5 retina TTTTATAAAA (5) 1.8 0.0018 E16.5 retina ATGGTGACTC (3) 5.4 0.0054 E16.5 retina ACAGCATTGA (3) 3.6 0.0036 E16.5 retina TTTTATAAAA (5) 3.6 0.0036 E16.5 retina GAGAAATCTT (3) 1.8 0.0018 E16.5 retina GTGCCAAGGA (4) 1.8 0.0018 E16.5 retina TGCCCAGGAC (9) 1.8 0.0018 E18.5 retina TTTTATAAAA (5) 10.9 0.0109 E18.5 retina GTGCCAAGGA (4) 9.1 0.0091 E18.5 retina ATGGTGACTC (3) 1.8 0.0018 P0.5 retina ATGGTGACTC (3) 3.9 0.0039 P0.5 retina TTTTATAAAA (5) 2 0.002 P2.5 retina TTTTATAAAA (5) 12.3 0.0123 P2.5 retina GTGCCAAGGA (4) 10.6 0.0106 P4.5 retina TTTTATAAAA (5) 7.9 0.0079 P4.5 retina GTGCCAAGGA (4) 4 0.004 P4.5 retina TGCCCAGGAC (9) 4 0.004 P4.5 retina TTTTAGTAAG (2) 2 0.002 P6.5 retina TTTTATAAAA (5) 6.7 0.0067 P6.5 retina ATGGTGACTC (3) 5 0.005 P6.5 retina GTGCCAAGGA (4) 5 0.005 P6.5 retina GAGAAATCTT (3) 3.3 0.0033 P10.5 crx- retina GTGCCAAGGA (4) 18.6 0.0186 P10.5 crx- retina ACCAGCATTG (2) 3.7 0.0037 P10.5 crx- retina TTTTAGTAAG (2) 3.7 0.0037 P10.5 crx- retina TTTTATAAAA (5) 1.9 0.0019 P10.5 crx+ retina GTGCCAAGGA (4) 17.3 0.0173 Adult retinal GTGCCAAGGA (4) 5.6 0.0056 Adult retinal ATGGTGACTC (3) 1.9 0.0019 Adult retinal TGCCCAGGAC (9) 1.9 0.0019 Adult retinal TTTTAGTAAG (2) 1.9 0.0019 ONL GTGCCAAGGA (4) 7.7 0.0077 ONL TTTTATAAAA (5) 5.7 0.0057 ONL AATTTGATGC (5) 1.9 0.0019