Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.244190	Trim23	tripartite motif protein 23	13		81003
Gene Ontology	cytoplasm | GTP binding | intracellular | nucleus | protein ubiquitination | small GTPase mediated signal transduction | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	TRIM23[tripartite motif-containing 23]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCTGTCAGC (3) 9.8 0.0098 P8 Cb GC GTTTATTAAA (7) 1.6 0.0016 Cb medulloblastoma TGCTGTCAGC (3) 9.2 0.0092 Cb medulloblastoma AAAAACATAA (5) 4.6 0.0046 Cb medulloblastoma GTTTATTAAA (7) 2.3 0.0023 P8 GC+1d culture TGCTGTCAGC (3) 12.6 0.0126 P8 GC+1d culture TGTGGGTCTG (2) 3.4 0.0034 P8 GC+1d culture AAAAACATAA (5) 2.3 0.0023 P8 GC+1d culture GTTTATTAAA (7) 2.3 0.0023 P8 GC+SHH+1d culture TGCTGTCAGC (3) 9.4 0.0094 P8 GC+SHH+1d culture GTTTATTAAA (7) 8.2 0.0082 P8 GC+SHH+1d culture AAAAACATAA (5) 7 0.007 P8 GC+SHH+1d culture TGTGGGTCTG (2) 2.3 0.0023 3T3 fibroblasts TGCTGTCAGC (3) 10.5 0.0105 E15 cortex TGCTGTCAGC (3) 4.9 0.0049 P1 cortex TGCTGTCAGC (3) 4.5 0.0045 Hypothalamus AAAAACATAA (5) 5.4 0.0054 Hypothalamus GTTTATTAAA (7) 5.4 0.0054 Hypothalamus TGCTGTCAGC (3) 5.4 0.0054 E12.5 retina TGCTGTCAGC (3) 9.4 0.0094 E12.5 retina GTTTATTAAA (7) 1.9 0.0019 E14.5 retina TGCTGTCAGC (3) 7.3 0.0073 E14.5 retina GTTTATTAAA (7) 1.8 0.0018 E16.5 retina TGCTGTCAGC (3) 7.2 0.0072 E16.5 retina GTTTATTAAA (7) 3.6 0.0036 E18.5 retina GTTTATTAAA (7) 3.6 0.0036 P0.5 retina TGCTGTCAGC (3) 15.7 0.0157 P0.5 retina GTTTATTAAA (7) 2 0.002 P0.5 retina TGTGGGTCTG (2) 2 0.002 P2.5 retina GTTTATTAAA (7) 3.5 0.0035 P2.5 retina TGCTGTCAGC (3) 3.5 0.0035 P4.5 retina TGCTGTCAGC (3) 9.9 0.0099 P4.5 retina GTTTATTAAA (7) 7.9 0.0079 P4.5 retina AAAAACATAA (5) 2 0.002 P6.5 retina TGCTGTCAGC (3) 10 0.01 P6.5 retina TGTGGGTCTG (2) 1.7 0.0017 P10.5 crx- retina TGCTGTCAGC (3) 16.7 0.0167 P10.5 crx- retina GTTTATTAAA (7) 1.9 0.0019 P10.5 crx- retina TGTGGGTCTG (2) 1.9 0.0019 P10.5 crx+ retina TGCTGTCAGC (3) 15.4 0.0154 P10.5 crx+ retina TGTGGGTCTG (2) 1.9 0.0019 Adult retinal TGCTGTCAGC (3) 7.4 0.0074 ONL TGCTGTCAGC (3) 7.7 0.0077 ONL AAAAACATAA (5) 1.9 0.0019