Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24449	5930405J04Rik	RIKEN cDNA 5930405J04 gene	10		68094
Gene Ontology	nucleus
Human Homolog	SMARCC2[SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAATGAAAC (2) 6.5 0.0065 Cb medulloblastoma AGACTGGCAA 9.2 0.0092 Cb medulloblastoma AAAATGAAAC (2) 4.6 0.0046 Cb medulloblastoma GAGACCACCG (2) 4.6 0.0046 P8 GC+1d culture GTTGCTGTTT (4) 8 0.008 P8 GC+1d culture GAGACCACCG (2) 3.4 0.0034 P8 GC+1d culture AAAATGAAAC (2) 1.1 0.0011 P8 GC+1d culture CAGAGAATTT (3) 1.1 0.0011 P8 GC+1d culture CCCAGCAGAG 1.1 0.0011 P8 GC+1d culture TACACAAAGA (4) 1.1 0.0011 P8 GC+1d culture TGGAAGGCTT (2) 1.1 0.0011 P8 GC+SHH+1d culture GTTGCTGTTT (4) 3.5 0.0035 P8 GC+SHH+1d culture TACACAAAGA (4) 2.3 0.0023 P8 GC+SHH+1d culture GCTGCATTCC 1.2 0.0012 3T3 fibroblasts GTTGCTGTTT (4) 7 0.007 3T3 fibroblasts ACGAGCAGCA (5) 3.5 0.0035 3T3 fibroblasts GAGACCACCG (2) 3.5 0.0035 3T3 fibroblasts TACACAAAGA (4) 3.5 0.0035 E15 cortex CCCAGCAGAG 4.9 0.0049 P1 cortex GTTGCTGTTT (4) 13.6 0.0136 P1 cortex GCTGCATTCC 4.5 0.0045 Hypothalamus GAGACCACCG (2) 3.6 0.0036 Hypothalamus AAAATGAAAC (2) 1.8 0.0018 Hypothalamus AGACTGGCAA 1.8 0.0018 E12.5 retina ACGAGCAGCA (5) 1.9 0.0019 E12.5 retina CCCAGCAGAG 1.9 0.0019 E12.5 retina TACACAAAGA (4) 1.9 0.0019 E14.5 retina TACACAAAGA (4) 3.6 0.0036 E14.5 retina ACGAGCAGCA (5) 1.8 0.0018 E14.5 retina GAGACCACCG (2) 1.8 0.0018 E14.5 retina GCTGCATTCC 1.8 0.0018 E14.5 retina GTTGCTGTTT (4) 1.8 0.0018 E16.5 retina GCTGCATTCC 3.6 0.0036 E16.5 retina AAAATGAAAC (2) 1.8 0.0018 E18.5 retina AAAATGAAAC (2) 5.5 0.0055 E18.5 retina CCCAGCAGAG 1.8 0.0018 E18.5 retina GCTGCATTCC 1.8 0.0018 P0.5 retina ACTTTTCTCA (2) 3.9 0.0039 P0.5 retina GAGACCACCG (2) 2 0.002 P0.5 retina GTTGCTGTTT (4) 2 0.002 P2.5 retina ACGAGCAGCA (5) 1.8 0.0018 P2.5 retina CAGAGAATTT (3) 1.8 0.0018 P2.5 retina CCCAGCAGAG 1.8 0.0018 P2.5 retina GCTGCATTCC 1.8 0.0018 P2.5 retina GTTGCTGTTT (4) 1.8 0.0018 P4.5 retina AAAATGAAAC (2) 2 0.002 P4.5 retina CAGAGAATTT (3) 2 0.002 P4.5 retina GTTGCTGTTT (4) 2 0.002 P6.5 retina ACTTTTCTCA (2) 8.3 0.0083 P6.5 retina GTTGCTGTTT (4) 6.7 0.0067 P6.5 retina ACGAGCAGCA (5) 3.3 0.0033 P10.5 crx- retina AAAATGAAAC (2) 1.9 0.0019 P10.5 crx- retina ACTTTTCTCA (2) 1.9 0.0019 P10.5 crx- retina CAGAGAATTT (3) 1.9 0.0019 P10.5 crx- retina CCCAGCAGAG 1.9 0.0019 P10.5 crx- retina GTTGCTGTTT (4) 1.9 0.0019 P10.5 crx- retina TACACAAAGA (4) 1.9 0.0019 P10.5 crx+ retina ACTTTTCTCA (2) 3.8 0.0038 P10.5 crx+ retina CCCAGCAGAG 3.8 0.0038 P10.5 crx+ retina CAGAGAATTT (3) 1.9 0.0019 P10.5 crx+ retina GCTGCATTCC 1.9 0.0019 P10.5 crx+ retina TGGAAGGCTT (2) 1.9 0.0019 Adult retinal ACTTTTCTCA (2) 9.3 0.0093 Adult retinal GTTGCTGTTT (4) 9.3 0.0093 Adult retinal GAGACCACCG (2) 7.4 0.0074 Adult retinal AAAATGAAAC (2) 1.9 0.0019 Adult retinal CAGAGAATTT (3) 1.9 0.0019 Adult retinal GCTGCATTCC 1.9 0.0019 ONL AAAATGAAAC (2) 3.8 0.0038 ONL ACTTTTCTCA (2) 1.9 0.0019 ONL GTTGCTGTTT (4) 1.9 0.0019 ONL TGGAAGGCTT (2) 1.9 0.0019