Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2445	Acadl	acetyl-Coenzyme A dehydrogenase, long-chain	1	1 27.3 cM	11363
Gene Ontology	acyl-CoA dehydrogenase activity | electron transport | extracellular space | fatty acid metabolism | long-chain-acyl-CoA dehydrogenase activity | mitochondrion | oxidoreductase activity
Human Homolog	ACADL[acyl-Coenzyme A dehydrogenase, long chain]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 109 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC AAAAAAAAAG (19) 3.3 0.0033 P8 Cb GC GTTTTGTAAA (5) 3.3 0.0033 P8 Cb GC AAAAAGGGTT (5) 1.6 0.0016 P8 Cb GC ACAAAACTTT (5) 1.6 0.0016 P8 Cb GC CATATACAGT 1.6 0.0016 P8 Cb GC TTTTTTTAAG (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AAAAAAAAAG (19) 13.9 0.0139 Cb medulloblastoma GTTTTGTAAA (5) 6.9 0.0069 Cb medulloblastoma GAAAACAGAA (13) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GTTTTGTAAA (5) 8 0.008 P8 GC+1d culture AAAAAAAAAG (19) 1.1 0.0011 P8 GC+1d culture AAAAAGGGTT (5) 1.1 0.0011 P8 GC+1d culture CAGCTAATGC 1.1 0.0011 P8 GC+1d culture CATATACAGT 1.1 0.0011 P8 GC+1d culture GCACTGACAG (5) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture AAAAAAAAAG (19) 5.9 0.0059 P8 GC+SHH+1d culture GTTTTGTAAA (5) 5.9 0.0059 P8 GC+SHH+1d culture AAAAAGGGTT (5) 2.3 0.0023 P8 GC+SHH+1d culture CAGCTAATGC 2.3 0.0023 P8 GC+SHH+1d culture TTTTTTTAAG (3) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CAGCTAATGC 3.5 0.0035 3T3 fibroblasts GTTTTGTAAA (5) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex ACAGAACCCT (3) 4.9 0.0049 E15 cortex GGGTTGGGGG (6) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AAAAAAAAAG (19) 9.1 0.0091 P1 cortex AAAAAGGGTT (5) 9.1 0.0091 P1 cortex GAAAACAGAA (13) 4.5 0.0045 P1 cortex GCACTGACAG (5) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GTTTTGTAAA (5) 10.9 0.0109 Hypothalamus AAAAAAAAAG (19) 5.4 0.0054 Hypothalamus ACAAAACTTT (5) 5.4 0.0054 Hypothalamus TTTTTTAAAG (6) 3.6 0.0036 Hypothalamus AAAAAGGGTT (5) 1.8 0.0018 Hypothalamus ACAGAACCCT (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina AAAAAGGGTT (5) 3.8 0.0038 E12.5 retina GTTTTGTAAA (5) 3.8 0.0038 E12.5 retina ACAAAACTTT (5) 1.9 0.0019 E12.5 retina ACAGAACCCT (3) 1.9 0.0019 E12.5 retina GCACTGACAG (5) 1.9 0.0019 E12.5 retina GCATTAGCCT (2) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GTTTTGTAAA (5) 14.6 0.0146 E14.5 retina GGGTTGGGGG (6) 3.6 0.0036 E14.5 retina GTGGGAAGCA (2) 3.6 0.0036 E14.5 retina AAAAAGGGTT (5) 1.8 0.0018 E14.5 retina CAGCTAATGC 1.8 0.0018 E14.5 retina CATATACAGT 1.8 0.0018 E14.5 retina TTTTTTAAAG (6) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GTTTTGTAAA (5) 12.7 0.0127 E16.5 retina ACAAAACTTT (5) 1.8 0.0018 E16.5 retina ACAGAACCCT (3) 1.8 0.0018 E16.5 retina CAGCTAATGC 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina AAAAAAAAAG (19) 5.5 0.0055 E18.5 retina GTTTTGTAAA (5) 5.5 0.0055 E18.5 retina GCACTGACAG (5) 1.8 0.0018 E18.5 retina GTGGGAAGCA (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GTTTTGTAAA (5) 3.9 0.0039 P0.5 retina AAAAAGGGTT (5) 2 0.002 P0.5 retina ACAAAACTTT (5) 2 0.002 P0.5 retina CAGCTAATGC 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina AAAAAAAAAG (19) 3.5 0.0035 P2.5 retina AAAAAGGGTT (5) 3.5 0.0035 P2.5 retina GTTTTGTAAA (5) 3.5 0.0035 P2.5 retina ACAAAACTTT (5) 1.8 0.0018 P2.5 retina GAAAACAGAA (13) 1.8 0.0018 P2.5 retina TTTTTTAAAG (6) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina AAAAAAAAAG (19) 13.9 0.0139 P4.5 retina GTTTTGTAAA (5) 13.9 0.0139 P4.5 retina GAAAACAGAA (13) 4 0.004 P4.5 retina AAAAAGGGTT (5) 2 0.002 P4.5 retina AACTCACAGG (2) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina AAAAAAAAAG (19) 8.3 0.0083 P6.5 retina GTGGGAACCA (3) 5 0.005 P6.5 retina GTTTTGTAAA (5) 3.3 0.0033 P6.5 retina CAGCTAATGC 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GTTTTGTAAA (5) 9.3 0.0093 P10.5 crx- retina AAAAAAAAAG (19) 1.9 0.0019 P10.5 crx- retina AAAAAGGGTT (5) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina AAAAAAAAAG (19) 7.7 0.0077 P10.5 crx+ retina AAAAAGGGTT (5) 1.9 0.0019 P10.5 crx+ retina GCACTGACAG (5) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GCATTAGCCT (2) 11.1 0.0111 Adult retinal AAAAAAAAAG (19) 1.9 0.0019 Adult retinal AACTCACAGG (2) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GCATTAGCCT (2) 15.3 0.0153 ONL TTTTTTTAAG (3) 3.8 0.0038 ONL AAAAAAAAAG (19) 1.9 0.0019 ONL AACTCACAGG (2) 1.9 0.0019 ONL GGGTTGGGGG (6) 1.9 0.0019 ONL GTTTTGTAAA (5) 1.9 0.0019