Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.244612	Tcfcp2l3	transcription factor CP2-like 3	15		252973
Gene Ontology	DNA binding | regulation of transcription | transcription factor activity
Human Homolog	TFCP2L3[transcription factor CP2-like 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC AGTCAAAAAA (7) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AGTCAAAAAA (7) 16.2 0.0162 Cb medulloblastoma AGCGTGGTGG (3) 6.9 0.0069 Cb medulloblastoma GTGATCCTGC (2) 4.6 0.0046 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture AGCGTGGTGG (3) 5.7 0.0057 P8 GC+1d culture AGTCAAAAAA (7) 3.4 0.0034 P8 GC+1d culture TTGTGAATAT (6) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture AGTCAAAAAA (7) 8.2 0.0082 P8 GC+SHH+1d culture AGCGTGGTGG (3) 4.7 0.0047 P8 GC+SHH+1d culture TTGTGAATAT (6) 2.3 0.0023 P8 GC+SHH+1d culture GTGATCCTGC (2) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts AGCGTGGTGG (3) 14 0.014 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AGCGTGGTGG (3) 4.5 0.0045 P1 cortex AGTCAAAAAA (7) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus AGTCAAAAAA (7) 7.2 0.0072 Hypothalamus AGCGTGGTGG (3) 3.6 0.0036 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina AGCGTGGTGG (3) 3.8 0.0038 E12.5 retina AGTCAAAAAA (7) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina AGTCAAAAAA (7) 10.9 0.0109 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina AGTCAAAAAA (7) 1.8 0.0018 E16.5 retina TTGTGAATAT (6) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina AGTCAAAAAA (7) 10.9 0.0109 E18.5 retina AGCGTGGTGG (3) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina AGCGTGGTGG (3) 3.9 0.0039 P0.5 retina AGTCAAAAAA (7) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina AGTCAAAAAA (7) 8.8 0.0088 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina AGCGTGGTGG (3) 2 0.002 P4.5 retina AGTCAAAAAA (7) 2 0.002 P4.5 retina TTGTGAATAT (6) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina AGTCAAAAAA (7) 10 0.01 P6.5 retina AGCGTGGTGG (3) 3.3 0.0033 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina AGCGTGGTGG (3) 18.6 0.0186 P10.5 crx- retina AGTCAAAAAA (7) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina AGTCAAAAAA (7) 5.8 0.0058 P10.5 crx+ retina AGCGTGGTGG (3) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal AGTCAAAAAA (7) 9.3 0.0093 Adult retinal AGCGTGGTGG (3) 3.7 0.0037 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL AGTCAAAAAA (7) 3.8 0.0038 ONL AGCGTGGTGG (3) 1.9 0.0019