Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.244705
Trpm7
transient receptor potential cation channel, subfamily M, member 7
2
58800
Mm.244705
B930086H10Rik
RIKEN cDNA B930086H10 gene
2
319331
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGAAACTCAA (
4
)
3.3
0.0033
P8 Cb GC
AGATCACAAC (
3
)
3.3
0.0033
P8 Cb GC
AAATTGGAGG (
5
)
1.6
0.0016
Cb medulloblastoma
CTCCCGCTGG (
3
)
4.6
0.0046
Cb medulloblastoma
AATAATAAAA
(
4
)
2.3
0.0023
Cb medulloblastoma
TGAGCTCTCA
(
2
)
2.3
0.0023
P8 GC+1d culture
AGAAACTCAA (
4
)
1.1
0.0011
P8 GC+1d culture
TGGGTGCTGC
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AATAATAAAA
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AGAAACTCAA (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
CTAGAATTGG
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TGAGCTCTCA
(
2
)
1.2
0.0012
3T3 fibroblasts
AGAAACTCAA (
4
)
3.5
0.0035
E15 cortex
AAATTGGAGG (
5
)
4.9
0.0049
P1 cortex
AAATTGGAGG (
5
)
13.6
0.0136
P1 cortex
AATAATAAAA
(
4
)
4.5
0.0045
P1 cortex
TGAGCTCTCA
(
2
)
4.5
0.0045
Hypothalamus
AATAATAAAA
(
4
)
5.4
0.0054
Hypothalamus
TGAGCTCTCA
(
2
)
1.8
0.0018
E12.5 retina
AATAATAAAA
(
4
)
1.9
0.0019
E12.5 retina
AGAAACTCAA (
4
)
1.9
0.0019
E12.5 retina
CCCAAAAATT (
5
)
1.9
0.0019
E12.5 retina
TGAGCTCTCA
(
2
)
1.9
0.0019
E16.5 retina
AGATCACAAC (
3
)
3.6
0.0036
E18.5 retina
CTAGAATTGG
(
3
)
3.6
0.0036
E18.5 retina
CTCCCGCTGG (
3
)
1.8
0.0018
P0.5 retina
AGAAACTCAA (
4
)
3.9
0.0039
P2.5 retina
AATAATAAAA
(
4
)
8.8
0.0088
P2.5 retina
TGAGCTCTCA
(
2
)
3.5
0.0035
P2.5 retina
AGAAACTCAA (
4
)
1.8
0.0018
P4.5 retina
AGATCACAAC (
3
)
2
0.002
P4.5 retina
TGAGCTCTCA
(
2
)
2
0.002
P4.5 retina
TGGGTGCTGC
(
4
)
2
0.002
P6.5 retina
AGAAACTCAA (
4
)
3.3
0.0033
P6.5 retina
TGAGCTCTCA
(
2
)
1.7
0.0017
P10.5 crx- retina
AAATTGGAGG (
5
)
1.9
0.0019
P10.5 crx- retina
TGAGCTCTCA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGAGCTCTCA
(
2
)
3.8
0.0038
P10.5 crx+ retina
AGAAACTCAA (
4
)
1.9
0.0019
P10.5 crx+ retina
TGGGTGCTGC
(
4
)
1.9
0.0019
Adult retinal
TGAGCTCTCA
(
2
)
5.6
0.0056
Adult retinal
CTCCCGCTGG (
3
)
3.7
0.0037
Adult retinal
AGAAACTCAA (
4
)
1.9
0.0019
Adult retinal
AGATCACAAC (
3
)
1.9
0.0019
ONL
CTCCCGCTGG (
3
)
17.2
0.0172
ONL
CCCAAAAATT (
5
)
3.8
0.0038
ONL
TGAGCTCTCA
(
2
)
3.8
0.0038
ONL
AGAAACTCAA (
4
)
1.9
0.0019
