Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.244815
6330407A06Rik
RIKEN cDNA 6330407A06 gene
16
78090
Mm.244815
F730017E11Rik
RIKEN cDNA F730017E11 gene
16
319976
Mm.244815
Golgb1
golgi autoantigen, golgin subfamily b, macrogolgin 1
16
224139
Mm.244815
4930428L02Rik
RIKEN cDNA 4930428L02 gene
16
73878
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATGTGCTCCC
(
5
)
3.3
0.0033
P8 Cb GC
CGGCAGCTGG (
5
)
1.6
0.0016
Cb medulloblastoma
CATTTCTTAC
(
7
)
6.9
0.0069
Cb medulloblastoma
ATGTGCTCCC
(
5
)
2.3
0.0023
P8 GC+1d culture
ATGTGCTCCC
(
5
)
5.7
0.0057
P8 GC+1d culture
CATTTCTTAC
(
7
)
3.4
0.0034
P8 GC+SHH+1d culture
ATGTGCTCCC
(
5
)
3.5
0.0035
E15 cortex
CCAAGGTGAA
(
6
)
4.9
0.0049
E15 cortex
CGGCAGCTGG (
5
)
4.9
0.0049
Hypothalamus
ATGTGCTCCC
(
5
)
3.6
0.0036
Hypothalamus
CATTTCTTAC
(
7
)
1.8
0.0018
Hypothalamus
TGACTGAAGG (
9
)
1.8
0.0018
E12.5 retina
CATTTCTTAC
(
7
)
1.9
0.0019
E12.5 retina
CGGCAGCTGG (
5
)
1.9
0.0019
E12.5 retina
TGACTGAAGG (
9
)
1.9
0.0019
E14.5 retina
ATGTGCTCCC
(
5
)
3.6
0.0036
E16.5 retina
CATTTCTTAC
(
7
)
3.6
0.0036
E16.5 retina
ATGTGCTCCC
(
5
)
1.8
0.0018
E16.5 retina
CGGCAGCTGG (
5
)
1.8
0.0018
E16.5 retina
GAGGATAAAG (
6
)
1.8
0.0018
E18.5 retina
CATTTCTTAC
(
7
)
5.5
0.0055
E18.5 retina
ATGTGCTCCC
(
5
)
1.8
0.0018
E18.5 retina
CGGCAGCTGG (
5
)
1.8
0.0018
P0.5 retina
TCTTCACTCC
(
7
)
2
0.002
P0.5 retina
TGACTGAAGG (
9
)
2
0.002
P2.5 retina
CATTTCTTAC
(
7
)
3.5
0.0035
P2.5 retina
TCTTCACTCC
(
7
)
1.8
0.0018
P4.5 retina
ATGTGCTCCC
(
5
)
4
0.004
P4.5 retina
CCAAGGTGAA
(
6
)
2
0.002
P4.5 retina
TGACTGAAGG (
9
)
2
0.002
P6.5 retina
ATGTGCTCCC
(
5
)
3.3
0.0033
P6.5 retina
CATTTCTTAC
(
7
)
1.7
0.0017
P6.5 retina
GAGGATAAAG (
6
)
1.7
0.0017
P10.5 crx- retina
CCAAGGTGAA
(
6
)
1.9
0.0019
P10.5 crx+ retina
ATGTGCTCCC
(
5
)
3.8
0.0038
P10.5 crx+ retina
CATTTCTTAC
(
7
)
1.9
0.0019
P10.5 crx+ retina
GAGGATAAAG (
6
)
1.9
0.0019
Adult retinal
CATTTCTTAC
(
7
)
1.9
0.0019
Adult retinal
TGACTGAAGG (
9
)
1.9
0.0019
ONL
GAGGATAAAG (
6
)
1.9
0.0019
ONL
TCTTCACTCC
(
7
)
1.9
0.0019
