Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.245210	Lrig1	leucine-rich repeats and immunoglobulin-like domains 1	6	6 39.0 cM	16206
Gene Ontology	extracellular space | integral to membrane
Human Homolog	LRIG1[leucine-rich repeats and immunoglobulin-like domains 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGAACTTTG (5) 3.3 0.0033 P8 Cb GC TGGAAAAAAA (27) 3.3 0.0033 P8 Cb GC AAGCAGACTG (5) 1.6 0.0016 P8 Cb GC TTTTCAATGT (4) 1.6 0.0016 Cb medulloblastoma TGGAAAAAAA (27) 25.4 0.0254 Cb medulloblastoma TAAAATATTG (3) 4.6 0.0046 Cb medulloblastoma TTTTCAATGT (4) 4.6 0.0046 Cb medulloblastoma AAGCAGACTG (5) 2.3 0.0023 Cb medulloblastoma GAGAACTTTG (5) 2.3 0.0023 Cb medulloblastoma GGTCCCCGCT (4) 2.3 0.0023 P8 GC+1d culture TAAAATATTG (3) 4.6 0.0046 P8 GC+1d culture GAGAACTTTG (5) 2.3 0.0023 P8 GC+1d culture TGGAAAAAAA (27) 2.3 0.0023 P8 GC+1d culture AAGCAGACTG (5) 1.1 0.0011 P8 GC+1d culture GGGCCCAAGC (13) 1.1 0.0011 P8 GC+1d culture TTTTCAATGT (4) 1.1 0.0011 P8 GC+SHH+1d culture TGGAAAAAAA (27) 11.7 0.0117 P8 GC+SHH+1d culture AAGCAGACTG (5) 2.3 0.0023 P8 GC+SHH+1d culture TAAAATATTG (3) 2.3 0.0023 P8 GC+SHH+1d culture GAGAACTTTG (5) 1.2 0.0012 3T3 fibroblasts GGTCCCCGCT (4) 3.5 0.0035 E15 cortex AAGCAGACTG (5) 4.9 0.0049 E15 cortex GAGAACTTTG (5) 4.9 0.0049 E15 cortex TGGAAAAAAA (27) 4.9 0.0049 P1 cortex GAGAACTTTG (5) 4.5 0.0045 P1 cortex TAAAATATTG (3) 4.5 0.0045 Hypothalamus GAGAACTTTG (5) 7.2 0.0072 Hypothalamus AAGCAGACTG (5) 3.6 0.0036 Hypothalamus TAAAATATTG (3) 1.8 0.0018 Hypothalamus TGGAAAAAAA (27) 1.8 0.0018 E12.5 retina TGGAAAAAAA (27) 5.6 0.0056 E12.5 retina TAAAATATTG (3) 1.9 0.0019 E14.5 retina TGGAAAAAAA (27) 10.9 0.0109 E14.5 retina GAAACACAAA (7) 3.6 0.0036 E14.5 retina AAGCAGACTG (5) 1.8 0.0018 E14.5 retina TTTTCAATGT (4) 1.8 0.0018 E16.5 retina AAGCAGACTG (5) 3.6 0.0036 E16.5 retina TGGAAAAAAA (27) 3.6 0.0036 E16.5 retina TTTTCAATGT (4) 1.8 0.0018 E18.5 retina TGGAAAAAAA (27) 18.2 0.0182 P0.5 retina TGGAAAAAAA (27) 11.8 0.0118 P0.5 retina GGGCCCAAGC (13) 7.9 0.0079 P2.5 retina TGGAAAAAAA (27) 10.6 0.0106 P2.5 retina AAGCAGACTG (5) 1.8 0.0018 P4.5 retina GAGAACTTTG (5) 4 0.004 P4.5 retina AAGCAGACTG (5) 2 0.002 P4.5 retina TGGAAAAAAA (27) 2 0.002 P4.5 retina TTTTCAATGT (4) 2 0.002 P6.5 retina TGGAAAAAAA (27) 5 0.005 P6.5 retina GGTCCCCGCT (4) 1.7 0.0017 P6.5 retina TAAAATATTG (3) 1.7 0.0017 P10.5 crx- retina AAGCAGACTG (5) 5.6 0.0056 P10.5 crx- retina TGGAAAAAAA (27) 3.7 0.0037 P10.5 crx- retina TTTTCAATGT (4) 3.7 0.0037 P10.5 crx- retina GAGAACTTTG (5) 1.9 0.0019 P10.5 crx- retina GGTCCCCGCT (4) 1.9 0.0019 P10.5 crx+ retina TGGAAAAAAA (27) 5.8 0.0058 P10.5 crx+ retina AAGCAGACTG (5) 3.8 0.0038 P10.5 crx+ retina GGTCCCCGCT (4) 3.8 0.0038 Adult retinal GGTCCCCGCT (4) 7.4 0.0074 Adult retinal TGGAAAAAAA (27) 3.7 0.0037 Adult retinal AAGCAGACTG (5) 1.9 0.0019 ONL TAAAATATTG (3) 5.7 0.0057 ONL AAGCAGACTG (5) 1.9 0.0019 ONL GAAACACAAA (7) 1.9 0.0019