Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.245340	E430016L07Rik	RIKEN cDNA E430016L07 gene	19		319697
Mm.245340	Atrnl1	attractin like 1	19		226255
Gene Ontology	cellular_component unknown | G-protein coupled receptor protein signaling pathway | protein binding
Human Homolog	ATRNL1[attractin-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGCTGTGAG (4) 8.2 0.0082 P8 Cb GC CGCCGTCCAT (3) 3.3 0.0033 P8 Cb GC CGTGGCTCCC (2) 1.6 0.0016 P8 Cb GC GCTCGGAGCT (2) 1.6 0.0016 P8 Cb GC TAAAGTGTCC (5) 1.6 0.0016 Cb medulloblastoma CAGGACAAAG (2) 9.2 0.0092 Cb medulloblastoma AAATTGGCAG (6) 4.6 0.0046 Cb medulloblastoma CACTCAAAAA (6) 4.6 0.0046 Cb medulloblastoma TAAAGTGTCC (5) 4.6 0.0046 Cb medulloblastoma CGCCGTCCAT (3) 2.3 0.0023 P8 GC+1d culture CAGGACAAAG (2) 3.4 0.0034 P8 GC+1d culture GTGCTGTGAG (4) 2.3 0.0023 P8 GC+1d culture TAAAGTGTCC (5) 2.3 0.0023 P8 GC+1d culture AAATTGGCAG (6) 1.1 0.0011 P8 GC+1d culture CGTGGCTCCC (2) 1.1 0.0011 P8 GC+SHH+1d culture CAGGACAAAG (2) 4.7 0.0047 P8 GC+SHH+1d culture GTGCTGTGAG (4) 3.5 0.0035 P8 GC+SHH+1d culture TAAAGTGTCC (5) 2.3 0.0023 P8 GC+SHH+1d culture CACTCAAAAA (6) 1.2 0.0012 3T3 fibroblasts GTTCGAATCC (3) 7 0.007 3T3 fibroblasts AAATTGGCAG (6) 3.5 0.0035 E15 cortex AAATTGGCAG (6) 9.9 0.0099 E15 cortex GCTCGGAGCT (2) 9.9 0.0099 E15 cortex GTGCTGTGAG (4) 9.9 0.0099 E15 cortex ATGCTGAGGA (4) 4.9 0.0049 E15 cortex GTTCGAATCC (3) 4.9 0.0049 P1 cortex CAGGACAAAG (2) 9.1 0.0091 Hypothalamus CAGGACAAAG (2) 5.4 0.0054 Hypothalamus TAGAGTGTCC (5) 1.8 0.0018 E12.5 retina CAGGACAAAG (2) 5.6 0.0056 E12.5 retina GTGCTGTGAG (4) 1.9 0.0019 E14.5 retina GTGCTGTGAG (4) 7.3 0.0073 E14.5 retina CAGGACAAAG (2) 3.6 0.0036 E14.5 retina TAAAGTGTCC (5) 1.8 0.0018 E16.5 retina GTGCTGTGAG (4) 5.4 0.0054 E16.5 retina CAGGACAAAG (2) 3.6 0.0036 E16.5 retina TAAAGTGTCC (5) 1.8 0.0018 E16.5 retina TAGAGTGTCC (5) 1.8 0.0018 E18.5 retina GTGCTGTGAG (4) 10.9 0.0109 E18.5 retina CAGGACAAAG (2) 1.8 0.0018 E18.5 retina TCATCGTAAC (2) 1.8 0.0018 P0.5 retina GTGCTGTGAG (4) 9.8 0.0098 P0.5 retina ATGCTGAGGA (4) 2 0.002 P0.5 retina CAGGACAAAG (2) 2 0.002 P0.5 retina TAAAGTGTCC (5) 2 0.002 P0.5 retina TAGAGTGTCC (5) 2 0.002 P0.5 retina TCATCGTAAC (2) 2 0.002 P2.5 retina GTGCTGTGAG (4) 7 0.007 P2.5 retina CAGGACAAAG (2) 5.3 0.0053 P2.5 retina TAAAGTGTCC (5) 3.5 0.0035 P2.5 retina ATGCTGAGGA (4) 1.8 0.0018 P2.5 retina GCTCGGAGCT (2) 1.8 0.0018 P4.5 retina GTGCTGTGAG (4) 5.9 0.0059 P4.5 retina CAGGACAAAG (2) 4 0.004 P4.5 retina TCATCGTAAC (2) 2 0.002 P6.5 retina CAGGACAAAG (2) 10 0.01 P6.5 retina ATGCTGAGGA (4) 1.7 0.0017 P6.5 retina GTGCTGTGAG (4) 1.7 0.0017 P6.5 retina TAAAGTGTCC (5) 1.7 0.0017 P10.5 crx- retina AAATTGGCAG (6) 5.6 0.0056 P10.5 crx- retina CAGGACAAAG (2) 5.6 0.0056 P10.5 crx+ retina CAGGACAAAG (2) 5.8 0.0058 P10.5 crx+ retina CGTGGCTCCC (2) 1.9 0.0019 P10.5 crx+ retina TAAAGTGTCC (5) 1.9 0.0019 P10.5 crx+ retina TCATCGTAAC (2) 1.9 0.0019 Adult retinal CAGGACAAAG (2) 1.9 0.0019 Adult retinal GCTCGGAGCT (2) 1.9 0.0019 Adult retinal GTGCTGTGAG (4) 1.9 0.0019 Adult retinal TAGAGTGTCC (5) 1.9 0.0019 ONL CGTGGCTCCC (2) 1.9 0.0019 ONL TAGAGTGTCC (5) 1.9 0.0019