Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.245395	Pten	phosphatase and tensin homolog	19	19 24.5 cM	19211
Gene Ontology	cell migration | central nervous system development | hydrolase activity | induction of apoptosis | negative regulation of cell cycle | phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity | phosphoprotein phosphatase activity | protein amino acid dephosphorylation | protein-tyrosine-phosphatase activity
Human Homolog	PTEN[phosphatase and tensin homolog (mutated in multiple advanced cancers 1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 106 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TCCTTGGGGG (2) 57.1 0.0571 P8 Cb GC AAACATTTAG (2) 3.3 0.0033 P8 Cb GC CAGACGGAAG (2) 1.6 0.0016 P8 Cb GC TGCTGGCTGC (6) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma TCCTTGGGGG (2) 39.3 0.0393 Cb medulloblastoma CAGACGGAAG (2) 4.6 0.0046 Cb medulloblastoma ACACAGCTAC 2.3 0.0023 Cb medulloblastoma TGAAAGAAAA (5) 2.3 0.0023 Cb medulloblastoma TGCTGGCTGC (6) 2.3 0.0023 Cb medulloblastoma TTTAGTTTTA (3) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TCCTTGGGGG (2) 33.1 0.0331 P8 GC+1d culture CAGACGGAAG (2) 6.8 0.0068 P8 GC+1d culture TGCTGGCTGC (6) 3.4 0.0034 P8 GC+1d culture ACACAGCTAC 1.1 0.0011 P8 GC+1d culture TACATTTTCT (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TCCTTGGGGG (2) 36.3 0.0363 P8 GC+SHH+1d culture CAGACGGAAG (2) 7 0.007 P8 GC+SHH+1d culture ACACAGCTAC 4.7 0.0047 P8 GC+SHH+1d culture TACATTTTCT (2) 2.3 0.0023 3T3 fibroblasts TCCTTGGGGG (2) 66.6 0.0666 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CAGACGGAAG (2) 28 0.028 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts AGTTATTGTG (2) 7 0.007 3T3 fibroblasts TGCTGGCTGC (6) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex TCCTTGGGGG (2) 9.9 0.0099 E15 cortex AAACATTTAG (2) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TGGAACCTCA (3) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex TCCTTGGGGG (2) 40.9 0.0409 P1 cortex CAGACGGAAG (2) 4.5 0.0045 P1 cortex TTTAGTTTTA (3) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TCCTTGGGGG (2) 23.5 0.0235 Hypothalamus ACACAGCTAC 3.6 0.0036 Hypothalamus TGCTGGCTGC (6) 3.6 0.0036 Hypothalamus CAGACGGAAG (2) 1.8 0.0018 Hypothalamus TGGAACCTCA (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina TCCTTGGGGG (2) 48.8 0.0488 E12.5 retina ACACAGCTAC 1.9 0.0019 E12.5 retina CAGACGGAAG (2) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TCCTTGGGGG (2) 27.3 0.0273 E14.5 retina AAACATTTAG (2) 1.8 0.0018 E14.5 retina CAGACGGAAG (2) 1.8 0.0018 E14.5 retina GGAATGGGAA (3) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TCCTTGGGGG (2) 34.4 0.0344 E16.5 retina TACATTTTCT (2) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TCCTTGGGGG (2) 20 0.02 E18.5 retina TGCTGGCTGC (6) 3.6 0.0036 E18.5 retina GGAATGGGAA (3) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TCCTTGGGGG (2) 35.3 0.0353 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TGGAACCTCA (3) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina TCCTTGGGGG (2) 22.9 0.0229 P2.5 retina CAGACGGAAG (2) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TACATTTTCT (2) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TCCTTGGGGG (2) 19.8 0.0198 P4.5 retina ACACAGCTAC 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TGCTGGCTGC (6) 2 0.002 P4.5 retina TTTAGTTTTA (3) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina TCCTTGGGGG (2) 35 0.035 P6.5 retina CAGACGGAAG (2) 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina ACACAGCTAC 1.7 0.0017 P6.5 retina TACATTTTCT (2) 1.7 0.0017 P6.5 retina TGCTGGCTGC (6) 1.7 0.0017 P10.5 crx- retina TCCTTGGGGG (2) 83.6 0.0836 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina AAACATTTAG (2) 1.9 0.0019 P10.5 crx- retina CAGACGGAAG (2) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina TCCTTGGGGG (2) 46.1 0.0461 P10.5 crx+ retina CAGACGGAAG (2) 7.7 0.0077 P10.5 crx+ retina AAACATTTAG (2) 1.9 0.0019 P10.5 crx+ retina ACACAGCTAC 1.9 0.0019 P10.5 crx+ retina TACATTTTCT (2) 1.9 0.0019 P10.5 crx+ retina TGAAAGAAAA (5) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TCCTTGGGGG (2) 37 0.037 Adult retinal CAGACGGAAG (2) 3.7 0.0037 Adult retinal ACACAGCTAC 1.9 0.0019 Adult retinal GGAATGGGAA (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TGGAACCTCA (3) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL TCCTTGGGGG (2) 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AGTTATTGTG (2) 1.9 0.0019 ONL TGCTGGCTGC (6) 1.9 0.0019 ONL TGGAACCTCA (3) 1.9 0.0019