Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.245715	Snap23	synaptosomal-associated protein 23	2	2 61.8 cM	20619
Gene Ontology	intracellular protein transport | membrane | membrane fusion | plasma membrane | post-Golgi transport | protein transport | protein transporter activity | synaptosome | transport vesicle | t-SNARE activity | vacuole organization and biogenesis | vesicle targeting
Human Homolog	SNAP23[synaptosomal-associated protein, 23kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTGTGTG (115) 27.7 0.0277 P8 Cb GC TGTGTGTATG (18) 1.6 0.0016 Cb medulloblastoma TGTGTGTGTG (115) 30.1 0.0301 Cb medulloblastoma AAAGAAGCAG (6) 2.3 0.0023 P8 GC+1d culture TGTGTGTGTG (115) 27.4 0.0274 P8 GC+1d culture TGTGTGTATG (18) 2.3 0.0023 P8 GC+1d culture CTGATTTGTC 1.1 0.0011 P8 GC+1d culture TGTTTTGTTC (5) 1.1 0.0011 P8 GC+SHH+1d culture TGTGTGTGTG (115) 28.1 0.0281 P8 GC+SHH+1d culture TGTTTTGTTC (5) 1.2 0.0012 3T3 fibroblasts TGTGTGTGTG (115) 28 0.028 3T3 fibroblasts AAAGAAGCAG (6) 3.5 0.0035 3T3 fibroblasts CAGGAACATT (6) 3.5 0.0035 3T3 fibroblasts TGTTTTGTTC (5) 3.5 0.0035 P1 cortex TGTGTGTGTG (115) 18.2 0.0182 Hypothalamus TGTGTGTGTG (115) 25.4 0.0254 Hypothalamus TGTGTGTATG (18) 1.8 0.0018 E12.5 retina TGTGTGTGTG (115) 43.2 0.0432 E12.5 retina TGTTTTGTTC (5) 3.8 0.0038 E12.5 retina AAAGAAGCAG (6) 1.9 0.0019 E14.5 retina TGTGTGTGTG (115) 54.7 0.0547 E14.5 retina TGTTTTGTTC (5) 1.8 0.0018 E16.5 retina TGTGTGTGTG (115) 39.8 0.0398 E16.5 retina TGTTTTGTTC (5) 7.2 0.0072 E16.5 retina TGTGTGTATG (18) 3.6 0.0036 E18.5 retina TGTGTGTGTG (115) 47.3 0.0473 E18.5 retina TGTGTGTATG (18) 1.8 0.0018 P0.5 retina TGTGTGTGTG (115) 21.6 0.0216 P0.5 retina TGTTTTGTTC (5) 2 0.002 P2.5 retina TGTGTGTGTG (115) 35.2 0.0352 P2.5 retina AAAGAAGCAG (6) 1.8 0.0018 P4.5 retina TGTGTGTGTG (115) 47.6 0.0476 P4.5 retina TGTTTTGTTC (5) 4 0.004 P6.5 retina TGTGTGTGTG (115) 41.7 0.0417 P6.5 retina TGTTTTGTTC (5) 6.7 0.0067 P6.5 retina CTGATTTGTC 1.7 0.0017 P10.5 crx- retina TGTGTGTGTG (115) 59.4 0.0594 P10.5 crx- retina AAAGAAGCAG (6) 1.9 0.0019 P10.5 crx- retina CAGGAACATT (6) 1.9 0.0019 P10.5 crx- retina TGTTTTGTTC (5) 1.9 0.0019 P10.5 crx+ retina TGTGTGTGTG (115) 44.2 0.0442 P10.5 crx+ retina TGTTTTGTTC (5) 3.8 0.0038 Adult retinal TGTGTGTGTG (115) 53.7 0.0537 Adult retinal CTGATTTGTC 1.9 0.0019 Adult retinal TGTTTTGTTC (5) 1.9 0.0019 ONL TGTGTGTGTG (115) 23 0.023 ONL TGTGTGTATG (18) 1.9 0.0019