Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.245938
0610040D20Rik
RIKEN cDNA 0610040D20 gene
9
66070
Mm.245938
2900052N06Rik
RIKEN cDNA 2900052N06 gene
9
73029
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGAAATATA
(
4
)
3.3
0.0033
P8 Cb GC
AGGAGGAGGA (
16
)
1.6
0.0016
P8 Cb GC
GAAACATTCT (
7
)
1.6
0.0016
P8 Cb GC
TAGAGGGAAA (
4
)
1.6
0.0016
Cb medulloblastoma
TAGACTGCTT (
4
)
9.2
0.0092
Cb medulloblastoma
AACTTCTTGT (
5
)
4.6
0.0046
Cb medulloblastoma
GAAACATTCT (
7
)
2.3
0.0023
Cb medulloblastoma
GAGAAATATA
(
4
)
2.3
0.0023
P8 GC+1d culture
GAGAAATATA
(
4
)
13.7
0.0137
P8 GC+1d culture
AACTTCTTGT (
5
)
10.3
0.0103
P8 GC+SHH+1d culture
GAGAAATATA
(
4
)
14.1
0.0141
P8 GC+SHH+1d culture
TAGACTGCTT (
4
)
4.7
0.0047
P8 GC+SHH+1d culture
AACTTCTTGT (
5
)
3.5
0.0035
P8 GC+SHH+1d culture
AGGAGGAGGA (
16
)
1.2
0.0012
P8 GC+SHH+1d culture
GAAACATTCT (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
TAGAGGGAAA (
4
)
1.2
0.0012
P1 cortex
AACTTCTTGT (
5
)
9.1
0.0091
P1 cortex
GAAACATTCT (
7
)
4.5
0.0045
Hypothalamus
GAGAAATATA
(
4
)
14.5
0.0145
Hypothalamus
TAGACTGCTT (
4
)
5.4
0.0054
Hypothalamus
AACTTCTTGT (
5
)
1.8
0.0018
E12.5 retina
GAGAAATATA
(
4
)
3.8
0.0038
E14.5 retina
AACTTCTTGT (
5
)
5.5
0.0055
E14.5 retina
GAGAAATATA
(
4
)
5.5
0.0055
E14.5 retina
GAAACATTCT (
7
)
1.8
0.0018
E16.5 retina
GAGAAATATA
(
4
)
10.9
0.0109
E16.5 retina
AACTTCTTGT (
5
)
9.1
0.0091
E16.5 retina
TAGACTGCTT (
4
)
3.6
0.0036
E16.5 retina
GAAACATTCT (
7
)
1.8
0.0018
E18.5 retina
GAGAAATATA
(
4
)
9.1
0.0091
E18.5 retina
AACTTCTTGT (
5
)
1.8
0.0018
E18.5 retina
TAGACTGCTT (
4
)
1.8
0.0018
P0.5 retina
TAGACTGCTT (
4
)
3.9
0.0039
P0.5 retina
AACTTCTTGT (
5
)
2
0.002
P0.5 retina
AGGAGGAGGA (
16
)
2
0.002
P0.5 retina
GAGAAATATA
(
4
)
2
0.002
P2.5 retina
GAGAAATATA
(
4
)
10.6
0.0106
P2.5 retina
AACTTCTTGT (
5
)
1.8
0.0018
P4.5 retina
GAGAAATATA
(
4
)
5.9
0.0059
P4.5 retina
GAAAATATAT (
7
)
2
0.002
P4.5 retina
GAAACATTCT (
7
)
2
0.002
P4.5 retina
TAGAGGGAAA (
4
)
2
0.002
P6.5 retina
AACTTCTTGT (
5
)
6.7
0.0067
P6.5 retina
GAGAAATATA
(
4
)
5
0.005
P6.5 retina
TAGACTGCTT (
4
)
3.3
0.0033
P10.5 crx- retina
AACTTCTTGT (
5
)
9.3
0.0093
P10.5 crx- retina
TAGACTGCTT (
4
)
5.6
0.0056
P10.5 crx- retina
GAAACATTCT (
7
)
1.9
0.0019
P10.5 crx+ retina
GAGAAATATA
(
4
)
7.7
0.0077
P10.5 crx+ retina
AACTTCTTGT (
5
)
3.8
0.0038
P10.5 crx+ retina
AGGAGGAGGA (
16
)
3.8
0.0038
P10.5 crx+ retina
GAAACATTCT (
7
)
3.8
0.0038
Adult retinal
AACTTCTTGT (
5
)
7.4
0.0074
Adult retinal
TAGACTGCTT (
4
)
3.7
0.0037
Adult retinal
GAAAATATAT (
7
)
1.9
0.0019
Adult retinal
GAGAAATATA
(
4
)
1.9
0.0019
ONL
AACTTCTTGT (
5
)
7.7
0.0077
ONL
GAGAAATATA
(
4
)
5.7
0.0057
ONL
TAGAGGGAAA (
4
)
3.8
0.0038
ONL
TAGACTGCTT (
4
)
1.9
0.0019
