Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.24642
AW146242
expressed sequence AW146242
6
6 B3
232023
Human Homolog
DKFZP564K0822[hypothetical protein DKFZp564K0822]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 31 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTCTTTCTTG
(
2
)
8.2
0.0082
P8 Cb GC
GGCCGCCGGC
(
5
)
1.6
0.0016
Cb medulloblastoma
TTTAAAAAAA (
34
)
6.9
0.0069
P8 GC+1d culture
CTCTTTCTTG
(
2
)
18.3
0.0183
P8 GC+SHH+1d culture
CTCTTTCTTG
(
2
)
10.5
0.0105
P8 GC+SHH+1d culture
TTTAAAAAAA (
34
)
5.9
0.0059
P8 GC+SHH+1d culture
TTCTTTCTTG
(
3
)
1.2
0.0012
E15 cortex
CTCTTTCTTG
(
2
)
4.9
0.0049
P1 cortex
CTCTTTCTTG
(
2
)
9.1
0.0091
P1 cortex
TCTGTGCCCA
(
7
)
4.5
0.0045
Hypothalamus
TTTAAAAAAA (
34
)
10.9
0.0109
Hypothalamus
CTCTTTCTTG
(
2
)
1.8
0.0018
E12.5 retina
CTCTTTCTTG
(
2
)
3.8
0.0038
E12.5 retina
TTTAAAAAAA (
34
)
1.9
0.0019
E14.5 retina
TTTAAAAAAA (
34
)
9.1
0.0091
E14.5 retina
CTCTTTCTTG
(
2
)
1.8
0.0018
E14.5 retina
TCTGTGCCCA
(
7
)
1.8
0.0018
E16.5 retina
CTCTTTCTTG
(
2
)
5.4
0.0054
E16.5 retina
TTTAAAAAAA (
34
)
1.8
0.0018
E18.5 retina
CTCTTTCTTG
(
2
)
12.7
0.0127
E18.5 retina
TTTAAAAAAA (
34
)
10.9
0.0109
E18.5 retina
GGCCGCCGGC
(
5
)
1.8
0.0018
E18.5 retina
GTCCAAACAT
1.8
0.0018
P0.5 retina
CTCTTTCTTG
(
2
)
15.7
0.0157
P0.5 retina
TCTGTGCCCA
(
7
)
2
0.002
P0.5 retina
TTTAAAAAAA (
34
)
2
0.002
P2.5 retina
CTCTTTCTTG
(
2
)
26.4
0.0264
P2.5 retina
TCTGTGCCCA
(
7
)
1.8
0.0018
P2.5 retina
TTTAAAAAAA (
34
)
1.8
0.0018
P4.5 retina
CTCTTTCTTG
(
2
)
31.7
0.0317
P4.5 retina
TTTAAAAAAA (
34
)
5.9
0.0059
P4.5 retina
GGCCGCCGGC
(
5
)
2
0.002
P4.5 retina
TCTGTGCCCA
(
7
)
2
0.002
P6.5 retina
CTCTTTCTTG
(
2
)
45
0.045
P6.5 retina
TTTAAAAAAA (
34
)
6.7
0.0067
P10.5 crx- retina
CTCTTTCTTG
(
2
)
37.2
0.0372
P10.5 crx- retina
TCTGTGCCCA
(
7
)
3.7
0.0037
P10.5 crx- retina
TTCTTTCTTG
(
3
)
1.9
0.0019
P10.5 crx+ retina
CTCTTTCTTG
(
2
)
28.8
0.0288
P10.5 crx+ retina
GTCCAAACAT
1.9
0.0019
P10.5 crx+ retina
TCTGTGCCCA
(
7
)
1.9
0.0019
P10.5 crx+ retina
TTCTTTCTTG
(
3
)
1.9
0.0019
Adult retinal
CTCTTTCTTG
(
2
)
31.5
0.0315
Adult retinal
GGCCGCCGGC
(
5
)
1.9
0.0019
Adult retinal
GTCCAAACAT
1.9
0.0019
ONL
CTCTTTCTTG
(
2
)
21.1
0.0211
ONL
TTTAAAAAAA (
34
)
7.7
0.0077
ONL
TCTGTGCCCA
(
7
)
1.9
0.0019
